RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 FCN1O00602 326 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 OR5AU1Q8NGC0 362 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 C18orf32Q8TCD1 76 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 ZNF414Q96IQ9 312 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
CDKL5-202ENST00000379996 TRBV6-1A0A0K0K1D8 114 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 TIMM23O14925 209 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 FAM106CPP0CH98 169 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 DLX1P56177 255 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 TSKUQ8WUA8 353 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 HSPB9Q9BQS6 159 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 MIEN1Q9BRT3 115 aa6.04□□□□□ -1.44
CDKL5-202ENST00000379996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 A6NDX4 124 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 OR7C2O60412 319 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 CA1P00915 261 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 HLA-DQA1P01909 254 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 REG1BP48304 166 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 CRIP2P52943 208 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 Q71RC1 249 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 GATD1Q8NB37 220 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 MAPK1IP1LQ8NDC0 245 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 GRAMD2BQ96HH9 432 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 RBM14Q96PK6 669 aaKnown RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 SVEP1Q4LDE5 3571 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 CENPEQ02224 2701 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 MRPS12O15235 138 aaKnown RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 CNTFRP26992 372 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 UBE2L3P68036 154 aaKnown RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 C19orf35Q6ZS72 473 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 SPATA12Q7Z6I5 190 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 NPIPB3Q92617 1050 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 I3L2K1 104 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 M0QZK8 103 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 CORTO00230 105 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 ZNF324O75467 553 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-202ENST00000379996 C10orf113Q5VZT2 155 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 OR1L4Q8NGR5 311 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 GTSF1Q8WW33 167 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 PAXXQ9BUH6 204 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 ZNF492Q9P255 531 aa6.03□□□□□ -1.44
CDKL5-202ENST00000379996 BRI3O95415 125 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 LY6G6DO95868 133 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 SCGB1D1O95968 90 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 ERHP84090 104 aaKnown RBP6.02□□□□□ -1.45
CDKL5-202ENST00000379996 VMA21Q3ZAQ7 101 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 FBLN7Q53RD9 439 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 ATP5L2Q7Z4Y8 100 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 ALKBH7Q9BT30 221 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-202ENST00000379996 HINT2Q9BX68 163 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 NRN1Q9NPD7 142 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 NBR2O15453 112 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 TOMM40O96008 361 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 TIGITQ495A1 244 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 LINC00305Q7Z4B0 112 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 NHLRC2Q8NBF2 726 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 C1RLQ9NZP8 487 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM14CQ9P0S9 112 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 C2orf70A6NJV1 201 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 CRXO43186 299 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-202ENST00000379996 HLA-DRB1P01911 266 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 GNG5P63218 68 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 EPDR1Q9UM22 224 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 SIGLEC9Q9Y336 463 aa6.02□□□□□ -1.45
CDKL5-202ENST00000379996 OTOGQ6ZRI0 2925 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 SLC25A17O43808 307 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 SRIP30626 198 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 MMDQ15546 238 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 NAV2Q8IVL1 2488 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 MOB4Q9Y3A3 225 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 HILPDAQ9Y5L2 63 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 F11RQ9Y624 299 aaKnown RBP6.01□□□□□ -1.45
CDKL5-202ENST00000379996 A0A1W2PRD5 423 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 A0A1W2PRF3 423 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 A0A1W2PRM7 423 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 C3orf79P0CE67 100 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 IGLC1P0CG04 106 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 FOXA3P55318 350 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-202ENST00000379996 KIAA1644Q3SXP7 199 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 TOMM20LQ6UXN7 152 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 Q8N2B8 174 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF48Q96MX3 618 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-202ENST00000379996 NAT8BQ9UHF3 227 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 ARHGAP32A7KAX9 2087 aa6.01□□□□□ -1.45
CDKL5-202ENST00000379996 TRAV34A0A0B4J273 112 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 M0R143 59 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 COX7A2P2O60397 106 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 TCL1AP56279 114 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 SLC35B1P78383 322 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 C5orf64Q2M2E5 130 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 DEFB112Q30KQ8 113 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 BRD3OSQ6XYD6 125 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 ZNF575Q86XF7 245 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 C5orf56Q8N8D9 126 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 Q8N9W7 124 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 TMEM68Q96MH6 324 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 GFRA4Q9GZZ7 299 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 YAE1D1Q9NRH1 226 aa6□□□□□ -1.45
CDKL5-202ENST00000379996 ITPR2Q14571 2701 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms