RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 IL18Q14116 193 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 PYDC2Q56P42 97 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 TRIQKQ629K1 86 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 MZT2BQ6NZ67 158 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 TMEM256Q8N2U0 113 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 GPR82Q96P67 336 aa12.33□□□□□ -0.44
PDLIM4-202ENST00000379018 SMCO3A2RU48 225 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 PLA2G10O15496 165 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 INAFM2P0DMQ5 153 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 ANXA3P12429 323 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 OR8A1Q8NGG7 326 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 OR4D5Q8NGN0 318 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 OR10J6PQ8NGY7 276 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 LRRC20Q8TCA0 184 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 SCP2D1Q9UJQ7 156 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
PDLIM4-202ENST00000379018 GAGE12BA1L429 117 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 H3BRN7 92 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 WRBO00258 174 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 GAGE7O76087 117 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 GAGE12FP0CL80 117 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 GAGE12GP0CL81 117 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 GAGE12IP0CL82 117 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 M6PRP20645 277 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 SRPXP78539 464 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 ESRGQ1W209 222 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 RXFP4Q8TDU9 374 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 SCGB3A2Q96PL1 93 aa12.31□□□□□ -0.44
PDLIM4-202ENST00000379018 H3BP45 60 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 LYRM1O43325 122 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 S100A7P31151 101 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 RAP2BP61225 183 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 SPANXN5Q5MJ07 72 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 TMED4Q7Z7H5 227 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 RNASE8Q8TDE3 154 aaKnown RBP12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 TMEM263Q8WUH6 116 aaKnown RBP12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 MARVELD1Q9BSK0 173 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 PARD6GQ9BYG4 376 aaPredicted RBP12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 HIGD1AQ9Y241 93 aa12.3□□□□□ -0.44
PDLIM4-202ENST00000379018 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 OR5G3P0C626 314 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 RPL7P18124 248 aaKnown RBP12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 CXCL3P19876 107 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 BTF3P20290 206 aaKnown RBP12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 HOXA5P20719 270 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 LINC00315P59091 139 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 RPP30P78346 268 aaKnown RBP12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 KIR3DS1Q14943 382 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 ACOT7LQ6ZUV0 252 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 AKAP14Q86UN6 197 aa12.29□□□□□ -0.44
PDLIM4-202ENST00000379018 J3KRW8 73 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 PITX3O75364 302 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 MED6O75586 246 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 RLN2P04090 185 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 IL5P05113 134 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 CDKN1BP46527 198 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 PSG3Q16557 428 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 ZNF493Q6ZR52 646 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 ENKURQ8TC29 256 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 SHANK2-AS3Q9BTD1 123 aa12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 MRPS16Q9Y3D3 137 aaKnown RBP12.28□□□□□ -0.44
PDLIM4-202ENST00000379018 A0A1W2PPQ1 181 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 ANKRD20A5PA0PJZ0 165 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 PRSS46E5RG02 174 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 ADAP1O75689 374 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 VAMP1P23763 118 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 CYP2G1PQ6ZSU1 146 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 CCDC28AQ8IWP9 274 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 CIB3Q96Q77 187 aaPredicted RBP12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 UPK3BQ9BT76 320 aa12.27□□□□□ -0.45
PDLIM4-202ENST00000379018 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 H7BYZ3 331 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 SYNGR2O43760 224 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 HYPMO75409 117 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 LINC00869P0C866 280 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 Q5VSD8 79 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 TMPRSS5Q9H3S3 457 aa12.26□□□□□ -0.45
PDLIM4-202ENST00000379018 SNURFLB1AK76 121 aa12.25□□□□□ -0.45
PDLIM4-202ENST00000379018 INPP1P49441 399 aa12.25□□□□□ -0.45
PDLIM4-202ENST00000379018 AP3S2P59780 193 aa12.25□□□□□ -0.45
PDLIM4-202ENST00000379018 ZNF503Q96F45 646 aa12.25□□□□□ -0.45
PDLIM4-202ENST00000379018 STRAPQ9Y3F4 350 aaKnown RBP12.25□□□□□ -0.45
PDLIM4-202ENST00000379018 FAM240BA0A1B0GVZ2 78 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 DUXBA0A1W2PPF3 345 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 CENPXA8MT69 81 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 EREGO14944 169 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 HOXB5P09067 269 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 ANXA7P20073 488 aaKnown RBP12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 LYPD1Q8N2G4 141 aa12.24□□□□□ -0.45
PDLIM4-202ENST00000379018 A0A087X0K7 114 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 C7orf66A4D0T2 115 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 H3BTX0 84 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 BTCP35070 178 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 RRAS2P62070 204 aaPredicted RBP12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 GFI1BQ5VTD9 330 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 LINC00612Q8N6U2 182 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 FRZBQ92765 325 aa12.23□□□□□ -0.45
PDLIM4-202ENST00000379018 ARL6Q9H0F7 186 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms