RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 S4R3C0 116 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 LINC01548A6NM66 108 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 THYN1Q9P016 225 aa15.23■□□□□ 0.03
SSU72-204ENST00000378726 ATP6V0E1O15342 81 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 HYPMO75409 117 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 IGKV1-17P01599 117 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 BATFQ16520 125 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 UNQ5815/PRO19632Q6UWF5 114 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 MOB4Q9Y3A3 225 aa15.22■□□□□ 0.03
SSU72-204ENST00000378726 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.22■□□□□ 0.037e-9■□□□□ 10.7
SSU72-204ENST00000378726 PCP4P48539 62 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 Q5PR19 223 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 DMRTA1Q5VZB9 504 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 OR2J3O76001 311 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 NDUFB8O95169 186 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 PLP1P60201 277 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 UBE2L3P68036 154 aaKnown RBP15.21■□□□□ 0.03
SSU72-204ENST00000378726 ECSCRQ19T08 205 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 COX19Q49B96 90 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 ZFP30Q9Y2G7 519 aa15.21■□□□□ 0.03
SSU72-204ENST00000378726 DOPEY2Q9Y3R5 2298 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 IZUMO1RA6ND01 250 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 MFAP4P55083 255 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 HIST2H2BCQ6DN03 193 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 NBPF19A0A087WUL8 3843 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 HLA-DQA1P01909 254 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 APCSP02743 223 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 PYYP10082 97 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 LY6EQ16553 131 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 C21orf62-AS1Q17RA5 79 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 NIT1Q86X76 327 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 FAM19A2Q8N3H0 131 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 OR4B1Q8NGF8 309 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 FAM110DQ8TAY7 271 aaPredicted RBP15.2■□□□□ 0.02
SSU72-204ENST00000378726 PSMG3-AS1Q96PY0 264 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 PAXXQ9BUH6 204 aa15.2■□□□□ 0.02
SSU72-204ENST00000378726 H3BUX3 64 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 GNG7O60262 68 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 ZNF324O75467 553 aaPredicted RBP15.19■□□□□ 0.02
SSU72-204ENST00000378726 CTRLP40313 264 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 LYZP61626 148 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 SLAQ13239 276 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 TRAV30A0A087WSZ9 112 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 G3V318 75 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 J3QLI3 93 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 SPATA45Q537H7 98 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 TSKUQ8WUA8 353 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 C21orf62Q9NYP8 219 aa15.19■□□□□ 0.02
SSU72-204ENST00000378726 APCP25054 2843 aa15.18■□□□□ 0.02
SSU72-204ENST00000378726 TRAV34A0A0B4J273 112 aa15.18■□□□□ 0.02
SSU72-204ENST00000378726 C3orf79P0CE67 100 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 Q56UQ5 140 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 HIGD1AQ9Y241 93 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 CSPG4Q6UVK1 2322 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 IGHV3-23P01764 117 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 GDF5OSQ5U4N7 250 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 ZNF329Q86UD4 541 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 STXBP6Q8NFX7 210 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 MBD6Q96DN6 1003 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 Q96MF0 132 aa15.17■□□□□ 0.02
SSU72-204ENST00000378726 ZNF331Q9NQX6 463 aaPredicted RBP15.17■□□□□ 0.02
SSU72-204ENST00000378726 A6NDX4 124 aa15.16■□□□□ 0.02
SSU72-204ENST00000378726 F8W735 103 aaPredicted RBP15.16■□□□□ 0.02
SSU72-204ENST00000378726 TOMM40O96008 361 aa15.16■□□□□ 0.02
SSU72-204ENST00000378726 IGHV4-31P0DP07 118 aa15.16■□□□□ 0.02
SSU72-204ENST00000378726 ZNF48Q96MX3 618 aaPredicted RBP15.16■□□□□ 0.02
SSU72-204ENST00000378726 NTF3P20783 257 aa15.16■□□□□ 0.02
SSU72-204ENST00000378726 FXYD5Q96DB9 178 aa15.16■□□□□ 0.02
SSU72-204ENST00000378726 MRPL27Q9P0M9 148 aaKnown RBP15.16■□□□□ 0.02
SSU72-204ENST00000378726 TFPI2P48307 235 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 PRSS57Q6UWY2 283 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 ZNF491Q8N8L2 437 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 NUDT10Q8NFP7 164 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 C18orf32Q8TCD1 76 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 NUDT11Q96G61 164 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 PEX7O00628 323 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 LEMD1Q68G75 181 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 BCL6BQ8N143 479 aaPredicted RBP15.15■□□□□ 0.02
SSU72-204ENST00000378726 NUP35Q8NFH5 326 aa15.15■□□□□ 0.02
SSU72-204ENST00000378726 SLC25A39Q9BZJ4 359 aaPredicted RBP15.15■□□□□ 0.02
SSU72-204ENST00000378726 TCF21O43680 179 aa15.14■□□□□ 0.01
SSU72-204ENST00000378726 KLK9Q2XQG4 91 aa15.14■□□□□ 0.01
SSU72-204ENST00000378726 GRAMD2BQ96HH9 432 aa15.14■□□□□ 0.01
SSU72-204ENST00000378726 KLK9Q9UKQ9 250 aa15.14■□□□□ 0.01
SSU72-204ENST00000378726 OR2T8A6NH00 312 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 RHOGP84095 191 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 C15orf32Q32M92 178 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 FAM231DQ6ZW35 169 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 WIPF2Q8TF74 440 aaPredicted RBP15.13■□□□□ 0.01
SSU72-204ENST00000378726 LINC00527Q9UJ94 153 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 HELZ2Q9BYK8 2649 aaKnown RBP15.13■□□□□ 0.01
SSU72-204ENST00000378726 ZANQ9Y493 2812 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 IL4P05112 153 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 GNG5P63218 68 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 PRR27Q6MZM9 219 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 KRTAP1-3Q8IUG1 177 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 TXN2Q99757 166 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 UQCR10Q9UDW1 63 aa15.13■□□□□ 0.01
SSU72-204ENST00000378726 TRAV41A0A0B4J266 112 aa15.12■□□□□ 0.01
SSU72-204ENST00000378726 IGLC2P0DOY2 106 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 138.6 ms