RNA–Protein interactions for RNA: ENST00000378513.7

RER1-203, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 3,000 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-203ENST00000378513 FAM231DQ6ZW35 169 aa12.18□□□□□ -0.46
RER1-203ENST00000378513 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
RER1-203ENST00000378513 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
RER1-203ENST00000378513 CCL21O00585 134 aa12.18□□□□□ -0.46
RER1-203ENST00000378513 HBBP68871 147 aa12.18□□□□□ -0.46
RER1-203ENST00000378513 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
RER1-203ENST00000378513 FXYD7P58549 80 aa12.17□□□□□ -0.46
RER1-203ENST00000378513 I3L2K1 104 aa12.17□□□□□ -0.46
RER1-203ENST00000378513 CST9LQ9H4G1 147 aa12.17□□□□□ -0.46
RER1-203ENST00000378513 NCBP2LA6PVI3 153 aaKnown RBP12.16□□□□□ -0.46
RER1-203ENST00000378513 B9A039 149 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 CDKN1BP46527 198 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 FOXE3Q13461 319 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 Q86TA4 180 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 ZNF785A8K8V0 405 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 CHEK1O14757 476 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 NDUFS7O75251 213 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 TOMM40O96008 361 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 LTAP01374 205 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 SLC25A34Q6PIV7 304 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 STXBP6Q8NFX7 210 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 A0A1B0GXF2 115 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 A8MWL6 223 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 K7EIM0 57 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 ARMS2P0C7Q2 107 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 C8orf49Q96NF6 230 aa12.16□□□□□ -0.46
RER1-203ENST00000378513 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
RER1-203ENST00000378513 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
RER1-203ENST00000378513 KLF12Q9Y4X4 402 aa12.15□□□□□ -0.46
RER1-203ENST00000378513 TAX1BP3O14907 124 aa12.15□□□□□ -0.46
RER1-203ENST00000378513 IGLV2-11P01706 119 aa12.15□□□□□ -0.46
RER1-203ENST00000378513 COX19Q49B96 90 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 IGHV3OR16-13A0A075B7E8 117 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 IGHV3-74A0A0B4J1X5 117 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 C19orf71A6NCJ1 209 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 SAP30O75446 220 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 OCIAD2Q56VL3 154 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 WIPF2Q8TF74 440 aaPredicted RBP12.14□□□□□ -0.47
RER1-203ENST00000378513 RAB37Q96AX2 223 aa12.14□□□□□ -0.47
RER1-203ENST00000378513 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
RER1-203ENST00000378513 SYS1-DBNDD2H3BUS1 97 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 NDPQ00604 133 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 PSG9Q00887 426 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 C8orf31Q8N9H6 132 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 PRSS22Q9GZN4 317 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 LOC389332A0A1B0GUA5 103 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 HTR1DP28221 377 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 TM4SF20Q53R12 229 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 Q8TAT8 98 aa12.13□□□□□ -0.47
RER1-203ENST00000378513 TRAV30A0A087WSZ9 112 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 TRAV8-6A0A0B4J262 113 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 RBPMS2Q6ZRY4 209 aaKnown RBP12.12□□□□□ -0.47
RER1-203ENST00000378513 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 SERTM2A0A1B0GWG4 89 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 GNG7O60262 68 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 FAM106CPP0CH98 169 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 CRIP1P50238 77 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 FAM106AQ4KMX7 169 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 ZNF491Q8N8L2 437 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 RNF125Q96EQ8 232 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 TMUB1Q9BVT8 246 aa12.12□□□□□ -0.47
RER1-203ENST00000378513 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.11□□□□□ -0.474e-8■■■■■ 31.9
RER1-203ENST00000378513 IGKV2-40A0A087WW87 121 aaPredicted RBP12.11□□□□□ -0.47
RER1-203ENST00000378513 K7EP13 123 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 IGKV2D-40P01614 121 aaPredicted RBP12.11□□□□□ -0.47
RER1-203ENST00000378513 HLA-DRB1P01911 266 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 RBPJQ06330 500 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 FAM120AOSQ5T036 256 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 TMEM191AQ9H0A3 160 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 OR2J3O76001 311 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 WFDC3Q8IUB2 231 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 MEGF9Q9H1U4 602 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 OTORQ9NRC9 128 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 TRBV19A0A075B6N1 114 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 NBR2O15453 112 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 LIPFP07098 398 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 VKORC1Q9BQB6 163 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 CHRDL1Q9BU40 450 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 MAP1LC3CQ9BXW4 147 aa12.11□□□□□ -0.47
RER1-203ENST00000378513 CRYBG3Q68DQ2 2970 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 BPIFA4PQ86YQ2 179 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 AP1S3Q96PC3 154 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 PSG8Q9UQ74 426 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 TMEM213A2RRL7 107 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 SIGLEC15Q6ZMC9 328 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 DPM3Q9P2X0 92 aa12.1□□□□□ -0.47
RER1-203ENST00000378513 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
RER1-203ENST00000378513 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
RER1-203ENST00000378513 KLF5Q13887 457 aaPredicted RBP12.09□□□□□ -0.47
RER1-203ENST00000378513 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
RER1-203ENST00000378513 TMEM75Q8N9X5 138 aa12.09□□□□□ -0.47
RER1-203ENST00000378513 K7ENP7 123 aa12.09□□□□□ -0.47
RER1-203ENST00000378513 SHANK2-AS3Q9BTD1 123 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms