RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 CFAP126Q5VTH2 177 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 ZNF837Q96EG3 531 aaPredicted RBP9.56□□□□□ -0.88
NPHP4-202ENST00000378161 PRDM6Q9NQX0 595 aa9.56□□□□□ -0.88
NPHP4-202ENST00000378161 LTAP01374 205 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 IGHV3-13P01766 116 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 SAP25Q8TEE9 199 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 OOSP1A8MZH6 123 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 EFNA2O43921 213 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 VMA21Q3ZAQ7 101 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 TTTY12Q9BZ98 90 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 CALYQ9NYX4 217 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 ATP5G1P05496 136 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 LGALS3P17931 250 aaKnown RBP9.55□□□□□ -0.88
NPHP4-202ENST00000378161 CD40P25942 277 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 TTTY13Q9BZ97 58 aa9.55□□□□□ -0.88
NPHP4-202ENST00000378161 M0R2P5 195 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 PRSS2P07478 247 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 FMC1Q96HJ9 113 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 REPIN1Q9BWE0 567 aaKnown RBP9.54□□□□□ -0.88
NPHP4-202ENST00000378161 J3QLI3 93 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 NCR2O95944 276 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 PLAUP00749 431 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 ODF3L1Q8IXM7 274 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 TRAV40A0A0B4J280 105 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 PLNP26678 52 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 SIGLEC15Q6ZMC9 328 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 C17orf82Q86X59 251 aaPredicted RBP9.54□□□□□ -0.88
NPHP4-202ENST00000378161 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
NPHP4-202ENST00000378161 ATOX1O00244 68 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 ICE1Q9Y2F5 2266 aa9.54□□□□□ -0.88
NPHP4-202ENST00000378161 HAX1O00165 279 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 MGST3O14880 152 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 DIAPH2-AS1Q14236 149 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 PCSK4Q6UW60 755 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 TRGV11A0A075B6L2 103 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 A0A1B0GX51 115 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 ZNHIT1O43257 154 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 SPRY4Q9C004 299 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 GFRA4Q9GZZ7 299 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 SPTAN1Q13813 2472 aaKnown RBP9.53□□□□□ -0.88
NPHP4-202ENST00000378161 IMMP1LQ96LU5 166 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 PLXNB3Q9ULL4 1909 aa9.53□□□□□ -0.88
NPHP4-202ENST00000378161 A0A0U1RQV1 116 aa9.52□□□□□ -0.88
NPHP4-202ENST00000378161 CT83Q5H943 113 aa9.52□□□□□ -0.88
NPHP4-202ENST00000378161 MRPL14Q6P1L8 145 aaKnown RBP9.52□□□□□ -0.88
NPHP4-202ENST00000378161 KLK15Q9H2R5 256 aa9.52□□□□□ -0.88
NPHP4-202ENST00000378161 NDUFS7O75251 213 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 CRYGSP22914 178 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 HOXA4Q00056 320 aaPredicted RBP9.52□□□□□ -0.89
NPHP4-202ENST00000378161 BRK1Q8WUW1 75 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 LINC00527Q9UJ94 153 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 PRDX2P32119 198 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 SP5Q6BEB4 398 aaPredicted RBP9.52□□□□□ -0.89
NPHP4-202ENST00000378161 HELZP42694 1942 aaKnown RBP9.52□□□□□ -0.89
NPHP4-202ENST00000378161 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 PLCE1Q9P212 2302 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 WDR87Q6ZQQ6 2873 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 SHISA9B4DS77 424 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 RBP4P02753 201 aa9.52□□□□□ -0.89
NPHP4-202ENST00000378161 FAM90A9PA6NNJ1 464 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 C17orf98A8MV24 154 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 TNFAIP6P98066 277 aaPredicted RBP9.51□□□□□ -0.89
NPHP4-202ENST00000378161 CFHR1Q03591 330 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 NOTCH4Q99466 2003 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 DLL1O00548 723 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 PRRG2O14669 202 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 NDUFB3O43676 98 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 IGKV1-12A0A0C4DH73 117 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 IGKV1D-12P01611 117 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 RFPL3SP0C7P2 107 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 HLA-DMBP28068 263 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 GOLT1AQ6ZVE7 132 aa9.51□□□□□ -0.89
NPHP4-202ENST00000378161 H3BTX0 84 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 SYNJ2BPP57105 145 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 IGHG4P01861 327 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 WDR31Q8NA23 367 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 COL4A4P53420 1690 aaPredicted RBP9.5□□□□□ -0.89
NPHP4-202ENST00000378161 E9PLN8 166 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 FGF6P10767 208 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 RPL35AP18077 110 aaKnown RBP9.5□□□□□ -0.89
NPHP4-202ENST00000378161 TMEM258P61165 79 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 NPC2P61916 151 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 C20orf173Q96LM9 149 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
NPHP4-202ENST00000378161 KLK10O43240 276 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 ZNF826PQ6ZT77 177 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 Q8N1Y9 231 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 PYYP10082 97 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 TCF15Q12870 199 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 DEFB109BQ30KR1 87 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 ASPHD1Q5U4P2 390 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 BDP1A6H8Y1 2624 aa9.49□□□□□ -0.89
NPHP4-202ENST00000378161 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.49□□□□□ -0.89
NPHP4-202ENST00000378161 H7C1H1 209 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms