RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 CRIP1P50238 77 aa9.79□□□□□ -0.84
TNFSF13B-201ENST00000375887 VAMP3Q15836 100 aa9.79□□□□□ -0.84
TNFSF13B-201ENST00000375887 NDFIP1Q9BT67 221 aa9.79□□□□□ -0.84
TNFSF13B-201ENST00000375887 HILPDAQ9Y5L2 63 aa9.79□□□□□ -0.84
TNFSF13B-201ENST00000375887 SOX21Q9Y651 276 aaPredicted RBP9.79□□□□□ -0.84
TNFSF13B-201ENST00000375887 ARMS2P0C7Q2 107 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 NGBQ9NPG2 151 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 MAP1AP78559 2803 aaPredicted RBP9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 FAM231BA6NCW3 169 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 FAM90A27PA6NNH2 459 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 B9A039 149 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 M0R3E3 92 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 HAX1O00165 279 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 CHEK1O14757 476 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 LEPROTL1O95214 131 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 CNIH1O95406 144 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 CSN3P07498 182 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 SIGLEC15Q6ZMC9 328 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 ERASQ7Z444 233 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 ZNF491Q8N8L2 437 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 SHANK2-AS3Q9BTD1 123 aa9.78□□□□□ -0.84
TNFSF13B-201ENST00000375887 TMUB1Q9BVT8 246 aa9.77□□□□□ -0.84
TNFSF13B-201ENST00000375887 ONECUT1Q9UBC0 465 aa9.77□□□□□ -0.84
TNFSF13B-201ENST00000375887 IGF2RP11717 2491 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 MUC21A0A0G2JKD1 596 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 MUC21A0A140T8X8 626 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 IGHV3-23P01764 117 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 KLRD1Q13241 179 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 MUC21Q5SSG8 566 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 MUC15Q8N387 334 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 NEU4Q8WWR8 484 aaPredicted RBP9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 PMCHL2Q9BQD1 86 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 RNF24Q9Y225 148 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 VPS13CQ709C8 3753 aa9.77□□□□□ -0.85
TNFSF13B-201ENST00000375887 IGHV3OR16-8A0A075B7F1 116 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 CD3EP07766 207 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 H3BRN7 92 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 IL4P05112 153 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 ARF6P62330 175 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 CDSNQ15517 529 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 OCIAD2Q56VL3 154 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 BPIFA4PQ86YQ2 179 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 CST9LQ9H4G1 147 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 C1RLQ9NZP8 487 aa9.76□□□□□ -0.85
TNFSF13B-201ENST00000375887 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 FCGR2BP31994 310 aaPredicted RBP9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 RNF125Q96EQ8 232 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 ZNF414Q96IQ9 312 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 C8orf49Q96NF6 230 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 SCNM1Q9BWG6 230 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 HLA-DRB1P01911 266 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 HTR1DP28221 377 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 RPS20P60866 119 aaKnown RBP9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 FOXC1Q12948 553 aa9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 ZNF672Q499Z4 452 aaPredicted RBP9.75□□□□□ -0.85
TNFSF13B-201ENST00000375887 TMSB15BA0A087X1C1 80 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 FAM106CPP0CH98 169 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 RHOGP84095 191 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 PSG3Q16557 428 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 FAM106AQ4KMX7 169 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 MPV17L2Q567V2 206 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 FAM162BQ5T6X4 162 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 TMEM75Q8N9X5 138 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 CSTL1Q9H114 145 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 AKAP6Q13023 2319 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 SPTBN1Q01082 2364 aaKnown RBP9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 COL6A6A6NMZ7 2263 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 TRBV6-1A0A0K0K1D8 114 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 IGFL4Q6B9Z1 124 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 CFHR4Q92496 578 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 RNF5Q99942 180 aa9.74□□□□□ -0.85
TNFSF13B-201ENST00000375887 LIPFP07098 398 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 FOXE3Q13461 319 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 FANCD2OSQ96PS1 177 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 ST20Q9HBF5 79 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 WI2-2373I1.2A0A1W2PRP0 233 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 F8W735 103 aaPredicted RBP9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 NBR2O15453 112 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 TCTAP57738 103 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 HES1Q14469 280 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 LY6G5BQ8NDX9 201 aa9.73□□□□□ -0.85
TNFSF13B-201ENST00000375887 FXYD7P58549 80 aa9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 DPM3Q9P2X0 92 aa9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 NCR2O95944 276 aa9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 NDPQ00604 133 aa9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 LOXL1Q08397 574 aaPredicted RBP9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 VKORC1Q9BQB6 163 aa9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 SRSF8Q9BRL6 282 aaKnown RBP9.72□□□□□ -0.85
TNFSF13B-201ENST00000375887 TMEM213A2RRL7 107 aa9.71□□□□□ -0.85
TNFSF13B-201ENST00000375887 K7ERU9 68 aa9.71□□□□□ -0.85
TNFSF13B-201ENST00000375887 OR5AL1P0C617 328 aa9.71□□□□□ -0.85
TNFSF13B-201ENST00000375887 MAP1LC3CQ9BXW4 147 aa9.71□□□□□ -0.85
TNFSF13B-201ENST00000375887 NUDT3O95989 172 aa9.71□□□□□ -0.86
TNFSF13B-201ENST00000375887 RIGQ13278 110 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms