RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 CT45A7P0DMV0 189 aa10.3□□□□□ -0.76
MSH5-204ENST00000375755 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
MSH5-204ENST00000375755 PPP1R35Q8TAP8 253 aa10.3□□□□□ -0.76
MSH5-204ENST00000375755 GAFA1Q96PS6 74 aa10.3□□□□□ -0.76
MSH5-204ENST00000375755 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 HAX1O00165 279 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 GATA4P43694 442 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 PLP1P60201 277 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 NAV3Q8IVL0 2385 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 C17orf100A8MU93 164 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
MSH5-204ENST00000375755 OR8A1Q8NGG7 326 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 PERPQ96FX8 193 aa10.29□□□□□ -0.76
MSH5-204ENST00000375755 AZU1P20160 251 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 HSD52Q0P140 79 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 KLRB1Q12918 225 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 ADAMTSL5Q6ZMM2 481 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 CCL17Q92583 94 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 A0A096LNJ9 63 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 KBTBD11-OT1A0A1B0GTJ5 212 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.28□□□□□ -0.76
MSH5-204ENST00000375755 ORM2P19652 201 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 ADORA2A-AS1P86434 159 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 LOXL1Q08397 574 aaPredicted RBP10.28□□□□□ -0.76
MSH5-204ENST00000375755 CIARTQ8N365 385 aaPredicted RBP10.28□□□□□ -0.76
MSH5-204ENST00000375755 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 FAM222BQ8WU58 562 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 FMC1Q96HJ9 113 aa10.28□□□□□ -0.76
MSH5-204ENST00000375755 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 A1L4Q6 167 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 NPIPB6E9PJ23 425 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 LYNX1G3V0Z9 82 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 NDUFS8O00217 210 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 SMAD7O15105 426 aaKnown RBP10.27□□□□□ -0.76
MSH5-204ENST00000375755 LYNX1P0DP58 116 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 CSN1S1P47710 185 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 UCNP55089 124 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 PRSS57Q6UWY2 283 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 FA2HQ7L5A8 372 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 DPF1Q92782 380 aa10.27□□□□□ -0.76
MSH5-204ENST00000375755 UTP20O75691 2785 aaKnown RBP10.27□□□□□ -0.77
MSH5-204ENST00000375755 TCRAP04437 139 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 COL8A1P27658 744 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 ERHP84090 104 aaKnown RBP10.27□□□□□ -0.77
MSH5-204ENST00000375755 LYPD2Q6UXB3 125 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 INSIG2Q9Y5U4 225 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 TEX48A0A1B0GUV7 120 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 ARMS2P0C7Q2 107 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 CEACAM3P40198 252 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 RUSC1-AS1Q66K80 236 aa10.27□□□□□ -0.77
MSH5-204ENST00000375755 CSMD2Q7Z408 3487 aa10.26□□□□□ -0.77
MSH5-204ENST00000375755 WT1-ASQ06250 92 aa10.26□□□□□ -0.77
MSH5-204ENST00000375755 C10orf55Q5SWW7 151 aa10.26□□□□□ -0.77
MSH5-204ENST00000375755 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
MSH5-204ENST00000375755 OR5AN1Q8NGI8 311 aa10.26□□□□□ -0.77
MSH5-204ENST00000375755 PPIAL4CA0A0B4J2A2 164 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 IFI27P40305 119 aaPredicted RBP10.25□□□□□ -0.77
MSH5-204ENST00000375755 TM4SF20Q53R12 229 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 ZNF788Q6ZQV5 615 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 OR9G4Q8NGQ1 327 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 RNASE6Q93091 150 aaKnown RBP10.25□□□□□ -0.77
MSH5-204ENST00000375755 Q9H3A6 140 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 CGB1A6NKQ9 187 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 CACNG7P62955 275 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 CRYBG3Q68DQ2 2970 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 Q86TA4 180 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 CELSR1Q9NYQ6 3014 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 PRB3Q04118 309 aaPredicted RBP10.25□□□□□ -0.77
MSH5-204ENST00000375755 STXBP6Q8NFX7 210 aa10.25□□□□□ -0.77
MSH5-204ENST00000375755 FLYWCH2Q96CP2 140 aaKnown RBP10.25□□□□□ -0.77
MSH5-204ENST00000375755 hADV38S2A0JD32 116 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 LY6HO94772 140 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 FABP2P12104 132 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 GP9P14770 177 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 DLX1P56177 255 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 FXYD7P58549 80 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 OR4X2Q8NGF9 303 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 HARBI1Q96MB7 349 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 F11RQ9Y624 299 aaKnown RBP10.24□□□□□ -0.77
MSH5-204ENST00000375755 IGSF10Q6WRI0 2623 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 MAP1AP78559 2803 aaPredicted RBP10.24□□□□□ -0.77
MSH5-204ENST00000375755 TRAV26-1A0A087WT03 109 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 LOC389332A0A1B0GUA5 103 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 CCL3L1P16619 93 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 LGALS9CQ6DKI2 356 aa10.24□□□□□ -0.77
MSH5-204ENST00000375755 AKAP6Q13023 2319 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 ARHGAP32A7KAX9 2087 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 PPIAL4EA0A075B759 164 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 SIVA1O15304 175 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 PPIAL4FP0DN26 164 aa10.23□□□□□ -0.77
MSH5-204ENST00000375755 RAB9AP51151 201 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms