RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 NDUFA3O95167 84 aa11.04□□□□□ -0.64
MSH5-202ENST00000375740 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
MSH5-202ENST00000375740 FOXA3P55318 350 aaPredicted RBP11.04□□□□□ -0.64
MSH5-202ENST00000375740 STXBP6Q8NFX7 210 aa11.04□□□□□ -0.64
MSH5-202ENST00000375740 BLNKQ8WV28 456 aa11.04□□□□□ -0.64
MSH5-202ENST00000375740 GOSR1O95249 250 aa11.04□□□□□ -0.64
MSH5-202ENST00000375740 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
MSH5-202ENST00000375740 H0Y8G0 127 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 PLP1P60201 277 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 SLC25A34Q6PIV7 304 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 CHTOPQ9Y3Y2 248 aaKnown RBP11.03□□□□□ -0.64
MSH5-202ENST00000375740 PEX7O00628 323 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 TOX4O94842 621 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 MYCNOSP40205 109 aa11.03□□□□□ -0.64
MSH5-202ENST00000375740 NAA38Q9BRA0 125 aaKnown RBP11.03□□□□□ -0.64
MSH5-202ENST00000375740 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 K7EIM0 57 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 EFNA4P52798 201 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 GNG5P63218 68 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 KLF5Q13887 457 aaPredicted RBP11.02□□□□□ -0.64
MSH5-202ENST00000375740 C5orf64Q2M2E5 130 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 ST20Q9HBF5 79 aa11.02□□□□□ -0.64
MSH5-202ENST00000375740 PGPA6NDG6 321 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 HOXB4P17483 251 aaPredicted RBP11.02□□□□□ -0.65
MSH5-202ENST00000375740 LYZP61626 148 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 ITPR1Q14643 2758 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 KLF17Q5JT82 389 aaPredicted RBP11.02□□□□□ -0.65
MSH5-202ENST00000375740 RASL11BQ9BPW5 248 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 SGK494Q96LW2 274 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 SIRPDQ9H106 197 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 EPDR1Q9UM22 224 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 HIGD1AQ9Y241 93 aa11.02□□□□□ -0.65
MSH5-202ENST00000375740 ABCA1O95477 2261 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 H3BTX0 84 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 IGKV1-17P01599 117 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
MSH5-202ENST00000375740 GP9P14770 177 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 ZNF138P52744 262 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 FER1L6-AS1Q8NA97 138 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 MBD6Q96DN6 1003 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 SCRT2Q9NQ03 307 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 IGHV1-24A0A0C4DH33 117 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 NCBP2LA6PVI3 153 aaKnown RBP11.01□□□□□ -0.65
MSH5-202ENST00000375740 CD5LO43866 347 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 C12orf54Q6X4T0 127 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
MSH5-202ENST00000375740 SMIM12Q96EX1 92 aa11.01□□□□□ -0.65
MSH5-202ENST00000375740 FAM231BA6NCW3 169 aa11□□□□□ -0.65
MSH5-202ENST00000375740 HIGD1CA8MV81 97 aa11□□□□□ -0.65
MSH5-202ENST00000375740 CRXO43186 299 aaPredicted RBP11□□□□□ -0.65
MSH5-202ENST00000375740 CIDEAO60543 219 aa11□□□□□ -0.65
MSH5-202ENST00000375740 TIMM8BQ9Y5J9 83 aaPredicted RBP11□□□□□ -0.65
MSH5-202ENST00000375740 OOSP1A8MZH6 123 aa11□□□□□ -0.65
MSH5-202ENST00000375740 MINOS1Q5TGZ0 78 aa11□□□□□ -0.65
MSH5-202ENST00000375740 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
MSH5-202ENST00000375740 SLC25A39Q9BZJ4 359 aaPredicted RBP11□□□□□ -0.65
MSH5-202ENST00000375740 MINOS1-NBL1R4GNA1 71 aa11□□□□□ -0.65
MSH5-202ENST00000375740 S4R3C0 116 aa11□□□□□ -0.65
MSH5-202ENST00000375740 C7orf71A4D174 169 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 Q8N6K4 173 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 CHRDL1Q9BU40 450 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 GAGE10A6NGK3 116 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 LEPROTL1O95214 131 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 TCF24Q7RTU0 167 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 BPESC1Q9GZL8 116 aa10.99□□□□□ -0.65
MSH5-202ENST00000375740 OR2J3O76001 311 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 LMO4P61968 165 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 EBI3Q14213 229 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 JMJD8Q96S16 334 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 PEF1Q9UBV8 284 aaKnown RBP10.98□□□□□ -0.65
MSH5-202ENST00000375740 NDPQ00604 133 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 C2orf91Q6ZV80 131 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 FANCD2OSQ96PS1 177 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 Q9H3A6 140 aa10.98□□□□□ -0.65
MSH5-202ENST00000375740 GPR183P32249 361 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 KLF12Q9Y4X4 402 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 NPIPB5A8MRT5 1133 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 HSBP1L1C9JCN9 74 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 G3V4G9 280 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 UFSP1Q6NVU6 142 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 TMEM14CQ9P0S9 112 aa10.97□□□□□ -0.65
MSH5-202ENST00000375740 MED13LQ71F56 2210 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 IGLV11-55A0A075B6I3 123 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 TCTAP57738 103 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 FAM231DQ6ZW35 169 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 TTC9CQ8N5M4 171 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 ZNF491Q8N8L2 437 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 C5orf17Q8NAS9 161 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 GRAMD2BQ96HH9 432 aa10.96□□□□□ -0.65
MSH5-202ENST00000375740 OVOL3O00110 214 aa10.96□□□□□ -0.66
MSH5-202ENST00000375740 HIST1H1EP10412 219 aaKnown RBP10.96□□□□□ -0.66
MSH5-202ENST00000375740 UBE2E1P51965 193 aa10.96□□□□□ -0.66
MSH5-202ENST00000375740 HIST1H1AQ02539 215 aaPredicted RBP10.96□□□□□ -0.66
MSH5-202ENST00000375740 RASL11AQ6T310 242 aa10.96□□□□□ -0.66
MSH5-202ENST00000375740 OR1N2Q8NGR9 330 aa10.96□□□□□ -0.66
MSH5-202ENST00000375740 AJUBAQ96IF1 538 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms