RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 M0QZ24 198 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 UBE2G2P60604 165 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 MEF2BQ02080 365 aaPredicted RBP13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 LYPD1Q8N2G4 141 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 RARRES2Q99969 163 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 NKX6-2Q9C056 277 aaPredicted RBP13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 MLXQ9UH92 298 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 ANK2Q01484 3957 aa13.03□□□□□ -0.32
HLA-DMA-201ENST00000374843 SLC17A3O00476 420 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 SRSF3P84103 164 aaKnown RBP13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 PEA15Q15121 130 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 SHISA2Q6UWI4 295 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 LURAP1LQ8IV03 231 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 CCDC28AQ8IWP9 274 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 TCEAL7Q9BRU2 100 aa13.02□□□□□ -0.33
HLA-DMA-201ENST00000374843 C11orf94C9JXX5 98 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 PF4P02776 101 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 ATP5G3P48201 142 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 CD81P60033 236 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 C12orf54Q6X4T0 127 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 TCF24Q7RTU0 167 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 SLC7A5P1Q8MH63 180 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 EIF5A2Q9GZV4 153 aaKnown RBP13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
HLA-DMA-201ENST00000374843 ZNF785A8K8V0 405 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 H3BTX0 84 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 SOCS3O14543 225 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 SAMD13Q5VXD3 122 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 CST9LP1Q5W188 147 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 C3orf56Q8N813 242 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 RXFP4Q8TDU9 374 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 C11orf52Q96A22 123 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 Q9H3A6 140 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 NRN1Q9NPD7 142 aa13□□□□□ -0.33
HLA-DMA-201ENST00000374843 ZNF331Q9NQX6 463 aaPredicted RBP13□□□□□ -0.33
HLA-DMA-201ENST00000374843 C9JQL5 133 aa12.99□□□□□ -0.33
HLA-DMA-201ENST00000374843 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
HLA-DMA-201ENST00000374843 PDE6DO43924 150 aa12.99□□□□□ -0.33
HLA-DMA-201ENST00000374843 SNRPCP09234 159 aaKnown RBP12.99□□□□□ -0.33
HLA-DMA-201ENST00000374843 PSG9Q00887 426 aa12.99□□□□□ -0.33
HLA-DMA-201ENST00000374843 TRAV2A0A0B4J234 112 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 F6UZH7 168 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 SRP19P09132 144 aaKnown RBP12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 RANP62826 216 aaKnown RBP12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 DEFB114Q30KQ6 69 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 ARL6IP6Q8N6S5 226 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 C5orf17Q8NAS9 161 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 DYNLRB2Q8TF09 96 aa12.98□□□□□ -0.33
HLA-DMA-201ENST00000374843 TRAV8-2A0A0B4J237 113 aa12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 DCANP1Q8TF63 244 aa12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 MRPL53Q96EL3 112 aaKnown RBP12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 SLC35B3Q9H1N7 401 aa12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 CLEC5AQ9NY25 188 aa12.97□□□□□ -0.33
HLA-DMA-201ENST00000374843 TRAV25A0A0B4J276 109 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 TSPAN4O14817 238 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 SUMO1P63165 101 aaKnown RBP12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 EXOC3-AS1Q8N2X6 119 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 MS4A6AQ9H2W1 248 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 PRELID1Q9Y255 219 aa12.96□□□□□ -0.33
HLA-DMA-201ENST00000374843 VWFP04275 2813 aa12.96□□□□□ -0.34
HLA-DMA-201ENST00000374843 PGPA6NDG6 321 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 ISLRO14498 428 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 TMEM61Q8N0U2 210 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 CYB561D1Q8N8Q1 229 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 HIST1H2BAQ96A08 127 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
HLA-DMA-201ENST00000374843 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 SCO2A0A1W2PP80 73 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 TMEM218A2RU14 115 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 K7EQG2 157 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 PEX7O00628 323 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 IGLV1-51P01701 117 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 SLC25A5P05141 298 aaKnown RBP12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 SFTA3P0C7M3 94 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 RPL11P62913 178 aaKnown RBP12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 C2CD4CQ8TF44 421 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 EPDR1Q9UM22 224 aa12.94□□□□□ -0.34
HLA-DMA-201ENST00000374843 STAB1Q9NY15 2570 aa12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 CD300EQ496F6 205 aaPredicted RBP12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 WFDC9Q8NEX5 89 aa12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 C16orf92Q96LL3 132 aa12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 SPAG8Q99932 426 aaPredicted RBP12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 ATG101Q9BSB4 218 aa12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
HLA-DMA-201ENST00000374843 SERTM2A0A1B0GWG4 89 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 M0R3E3 92 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 SAP30O75446 220 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 TCRAP04437 139 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 INSL3P51460 131 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 RIPPLY3P57055 190 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 CMTM2Q8TAZ6 248 aa12.92□□□□□ -0.34
HLA-DMA-201ENST00000374843 ATP6V1G1O75348 118 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms