RNA–Protein interactions for RNA: ENST00000374116.3

HMGA1-203, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-203ENST00000374116 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
HMGA1-203ENST00000374116 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
HMGA1-203ENST00000374116 V9GYV3 84 aa11.3□□□□□ -0.6
HMGA1-203ENST00000374116 TMEM238LA0A1B0GVL6 79 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 HLA-DQA1P01909 254 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 UBE2E1P51965 193 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 PSG5Q15238 335 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 DYNAPQ8N1N2 210 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 DUX5Q96PT3 197 aa11.29□□□□□ -0.6
HMGA1-203ENST00000374116 AMMECR1Q9Y4X0 333 aaPredicted RBP11.29□□□□□ -0.6
HMGA1-203ENST00000374116 PGPEP1LA6NFU8 196 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 K7EN84 100 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 CRYGBP07316 175 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 NBEAP1P0C6P0 100 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 VAMP3Q15836 100 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 DEFB112Q30KQ8 113 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 Q6ZVH6 145 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 NUDT11Q96G61 164 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 ZNF48Q96MX3 618 aaPredicted RBP11.28□□□□□ -0.6
HMGA1-203ENST00000374116 TNFRSF19Q9NS68 423 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 HILPDAQ9Y5L2 63 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 NF1P21359 2839 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 JMJD1CQ15652 2540 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 IGHV1-3A0A0C4DH29 117 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 C8orf88P0DMB2 117 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 GATA2P23769 480 aaPredicted RBP11.28□□□□□ -0.6
HMGA1-203ENST00000374116 THAP8Q8NA92 274 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 TSKUQ8WUA8 353 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 BORCS7Q96B45 105 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 AJUBAQ96IF1 538 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
HMGA1-203ENST00000374116 IGHV3-72A0A0B4J1Y9 119 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 TRAV34A0A0B4J273 112 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 PSMB11A5LHX3 300 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 ODF3BA8MYP8 253 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 PMCHP20382 165 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 PVRIGQ6DKI7 326 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 OR11H6Q8NGC7 330 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 ZNF503Q96F45 646 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 EAF1Q96JC9 268 aaPredicted RBP11.27□□□□□ -0.61
HMGA1-203ENST00000374116 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.61
HMGA1-203ENST00000374116 OSTCQ9NRP0 149 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 TPSG1Q9NRR2 321 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
HMGA1-203ENST00000374116 TCRBV4S1A1TA0A5B7 111 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 BMPR1BO00238 502 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 OR7C2O60412 319 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 AMY1AP04745 511 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 RNF5Q99942 180 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 ST20Q9HBF5 79 aa11.26□□□□□ -0.61
HMGA1-203ENST00000374116 A0A1W2PRE2 83 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 RPL27AP46776 148 aaKnown RBP11.25□□□□□ -0.61
HMGA1-203ENST00000374116 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
HMGA1-203ENST00000374116 NPIPB3Q92617 1050 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 RPEQ96AT9 228 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 SIGLEC9Q9Y336 463 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 SLC17A3O00476 420 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 HLA-DRB1P01911 266 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 KLF5Q13887 457 aaPredicted RBP11.25□□□□□ -0.61
HMGA1-203ENST00000374116 TNXAQ16473 311 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 PRR27Q6MZM9 219 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 WNT10AQ9GZT5 417 aa11.25□□□□□ -0.61
HMGA1-203ENST00000374116 IGKV1D-37A0A075B6S9 117 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 COX7A2P2O60397 106 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 CRYGCP07315 174 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 PSG1P11464 419 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 IGLL1P15814 213 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 CD24P25063 80 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 OR8I2Q8N0Y5 310 aa11.24□□□□□ -0.61
HMGA1-203ENST00000374116 HELTA6NFD8 242 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 CORTO00230 105 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 CNTFRP26992 372 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 HTR1DP28221 377 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 SRIP30626 198 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 SSBP2P81877 361 aaPredicted RBP11.23□□□□□ -0.61
HMGA1-203ENST00000374116 C10orf113Q5VZT2 155 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 FAM167A-AS1Q96KT0 104 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 SLC25A2Q9BXI2 301 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 FRMD6-AS1P0C7T7 363 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 BVES-AS1Q5T3Y7 98 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 C12orf54Q6X4T0 127 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 TEX29Q8N6K0 151 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 ESM1Q9NQ30 184 aa11.23□□□□□ -0.61
HMGA1-203ENST00000374116 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
HMGA1-203ENST00000374116 ISLRO14498 428 aa11.22□□□□□ -0.61
HMGA1-203ENST00000374116 CRXO43186 299 aaPredicted RBP11.22□□□□□ -0.61
HMGA1-203ENST00000374116 HOXA3O43365 443 aaPredicted RBP11.22□□□□□ -0.61
HMGA1-203ENST00000374116 CRYBB3P26998 211 aa11.22□□□□□ -0.61
HMGA1-203ENST00000374116 GNG4P50150 75 aa11.22□□□□□ -0.61
HMGA1-203ENST00000374116 UBE2G1P62253 170 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms