RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 GLMPQ8WWB7 406 aa13.88□□□□□ -0.19
CDX4-201ENST00000373514 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
CDX4-201ENST00000373514 FAM167A-AS1Q96KT0 104 aa13.88□□□□□ -0.19
CDX4-201ENST00000373514 SLC25A2Q9BXI2 301 aa13.88□□□□□ -0.19
CDX4-201ENST00000373514 WFDC10AQ9H1F0 79 aa13.88□□□□□ -0.19
CDX4-201ENST00000373514 A0A1W2PS18 150 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 TSPAN4O14817 238 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 BUB3O43684 328 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 CD5P06127 495 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 GCHFRP30047 84 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 CD81P60033 236 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 PMS2P11Q13670 270 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 C16orf54Q6UWD8 224 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 RARRES2Q99969 163 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 SLC25A39Q9BZJ4 359 aaPredicted RBP13.87□□□□□ -0.19
CDX4-201ENST00000373514 TREM1Q9NP99 234 aa13.87□□□□□ -0.19
CDX4-201ENST00000373514 TRAV25A0A0B4J276 109 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 OR7C2O60412 319 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 IFNA1P01562 189 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 BMI1P35226 326 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 PSMB3P49720 205 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 PEA15Q15121 130 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 LEMD1Q68G75 181 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 PQLC2Q6ZP29 291 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 Q8N1Y9 231 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 ZNF503Q96F45 646 aa13.86□□□□□ -0.19
CDX4-201ENST00000373514 SPAG8Q99932 426 aaPredicted RBP13.86□□□□□ -0.19
CDX4-201ENST00000373514 LOC102723971A0A1B0GUV8 181 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 BCL2P10415 239 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 RPL11P62913 178 aaKnown RBP13.85□□□□□ -0.19
CDX4-201ENST00000373514 ZNF506Q5JVG8 444 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 GRAMD2BQ96HH9 432 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 MANBALQ9NQG1 85 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 H3BRN7 92 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 S100A1P23297 94 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 PPT1P50897 306 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 ICAM4Q14773 271 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 GTSCR1Q86UQ5 136 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 WFDC3Q8IUB2 231 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 STXBP6Q8NFX7 210 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 RXFP4Q8TDU9 374 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 SHANK2-AS3Q9BTD1 123 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 MS4A6AQ9H2W1 248 aa13.85□□□□□ -0.19
CDX4-201ENST00000373514 C9JQL5 133 aa13.84□□□□□ -0.19
CDX4-201ENST00000373514 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
CDX4-201ENST00000373514 FAM24BQ8N5W8 94 aa13.84□□□□□ -0.19
CDX4-201ENST00000373514 PAXXQ9BUH6 204 aa13.84□□□□□ -0.19
CDX4-201ENST00000373514 ZNF98A6NK75 572 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 OR10J4P0C629 311 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 PYYP10082 97 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 UBE2G2P60604 165 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 S100A7AQ86SG5 101 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 OR51M1Q9H341 326 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 TMEM167BQ9NRX6 74 aa13.83□□□□□ -0.2
CDX4-201ENST00000373514 PRKDCP78527 4128 aaKnown RBP13.83□□□□□ -0.2
CDX4-201ENST00000373514 PAGE4O60829 102 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 UBE2L3P68036 154 aaKnown RBP13.82□□□□□ -0.2
CDX4-201ENST00000373514 ODF3L2Q3SX64 289 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 LINC00052Q96N35 136 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 SMDT1Q9H4I9 107 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 C19orf73Q9NVV2 129 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
CDX4-201ENST00000373514 TMEM218A2RU14 115 aa13.81□□□□□ -0.2
CDX4-201ENST00000373514 OR4C46A6NHA9 309 aa13.81□□□□□ -0.2
CDX4-201ENST00000373514 TAGLN2P37802 199 aaKnown RBP13.81□□□□□ -0.2
CDX4-201ENST00000373514 DEFB125Q8N687 156 aa13.81□□□□□ -0.2
CDX4-201ENST00000373514 SUN5Q8TC36 379 aa13.81□□□□□ -0.2
CDX4-201ENST00000373514 DNASE2O00115 360 aaPredicted RBP13.8□□□□□ -0.2
CDX4-201ENST00000373514 OR8I2Q8N0Y5 310 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 DCANP1Q8TF63 244 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 FXYD5Q96DB9 178 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 SMAD5-AS1Q9Y6J3 95 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 HELTA6NFD8 242 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 KRBOX1C9JBD0 128 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 SRP19P09132 144 aaKnown RBP13.8□□□□□ -0.2
CDX4-201ENST00000373514 SFTA3P0C7M3 94 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 IGHV4-30-4P0DP06 118 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 S100A7P31151 101 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 MEF2BQ02080 365 aaPredicted RBP13.8□□□□□ -0.2
CDX4-201ENST00000373514 ZNF124Q15973 351 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 CST9LP1Q5W188 147 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 SLC35B3Q9H1N7 401 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 TMEM14CQ9P0S9 112 aa13.8□□□□□ -0.2
CDX4-201ENST00000373514 YTHDF2Q9Y5A9 579 aaKnown RBP13.8□□□□□ -0.2
CDX4-201ENST00000373514 OR11H12B2RN74 326 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 K7EQG2 157 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 C17orf77Q96MU5 243 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 MAP6D1Q9H9H5 199 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
CDX4-201ENST00000373514 FAM74A7A6NL05 159 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 C11orf94C9JXX5 98 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 SNRPCP09234 159 aaKnown RBP13.78□□□□□ -0.2
CDX4-201ENST00000373514 ATP5G3P48201 142 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 PAFAH1B2P68402 229 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 BPIFA4PQ86YQ2 179 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 ARL2-SNX15V9GYD0 113 aa13.78□□□□□ -0.2
CDX4-201ENST00000373514 ADCYAP1P18509 176 aa13.77□□□□□ -0.21
CDX4-201ENST00000373514 APRG1Q8IVJ8 170 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 652.9 ms