RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 F5H697 171 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 PEX7O00628 323 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 HERV-K104P63124 156 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 OR1L4Q8NGR5 311 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 NDUFAF3Q9BU61 184 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 TP73-AS1Q9UF72 201 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 SIGLEC9Q9Y336 463 aa5.05□□□□□ -1.6
CHD6-202ENST00000373222 SMIM27A0A1W2PRY6 76 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 BUB1B-PAK6H3BSN5 160 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PRYO14603 147 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 SLC25A5P05141 298 aaKnown RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 NBL1P41271 181 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 RPL27AP46776 148 aaKnown RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 KRTDAPP60985 99 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 ARF6P62330 175 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 MRPL23Q16540 153 aaKnown RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 VMA21Q3ZAQ7 101 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 EXOC3-AS1Q8N2X6 119 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 MUC15Q8N387 334 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 LINC00311Q8N616 119 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 NUP35Q8NFH5 326 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 OR4C5Q8NGB2 326 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 SAMD10Q9BYL1 202 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 TBL2Q9Y4P3 447 aaKnown RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 INSIG2Q9Y5U4 225 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 USP9YO00507 2555 aaPredicted RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 CACNA1AO00555 2505 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 IGHV3OR16-8A0A075B7F1 116 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PPIAL4CA0A0B4J2A2 164 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 A0A1W2PS18 150 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 CCL21O00585 134 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 TIMM23O14925 209 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 HOXA3O43365 443 aaPredicted RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 NDUFS7O75251 213 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PPIAL4GP0DN37 164 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PSG1P11464 419 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 NTF3P20783 257 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 MYCNOSP40205 109 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 ZNF137PP52743 207 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 LYZP61626 148 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PMCHL1Q16048 86 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 DNLZQ5SXM8 178 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 LCN12Q6JVE5 192 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 PPP1R27Q86WC6 154 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 Q8N976 141 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 THAP8Q8NA92 274 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 VSTM2AQ8TAG5 236 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 MRPL53Q96EL3 112 aaKnown RBP5.04□□□□□ -1.6
CHD6-202ENST00000373222 PRR25Q96S07 402 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 C7orf69Q9H7B7 122 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 OSTCQ9NRP0 149 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 KAAG1Q9UBP8 84 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 LY96Q9Y6Y9 160 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 MXRA5Q9NR99 2828 aa5.04□□□□□ -1.6
CHD6-202ENST00000373222 A1L4Q6 167 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 HIGD1CA8MV81 97 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 K7ENP7 123 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 ZNF253O75346 499 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 IGHV3-23P01764 117 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 GP9P14770 177 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 AMTP48728 403 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 ZNF672Q499Z4 452 aaPredicted RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 SRSF12Q8WXF0 261 aaKnown RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 MBD6Q96DN6 1003 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 GNB1LQ9BYB4 327 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 MRPL32Q9BYC8 188 aaKnown RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 KIR2DL5BA0A0G2JN68 375 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 KIR2DL5BA0A0G2JPC4 375 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 RS1O15537 224 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 RBP4P02753 201 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 GPX1P07203 203 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 NBEAP1P0C6P0 100 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 FOXA3P55318 350 aaPredicted RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 TPPP2P59282 170 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 RPL19P84098 196 aaKnown RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 PLGLAQ15195 96 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 TMEM30BQ3MIR4 351 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 C6orf226Q5I0X4 101 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 C1orf194Q5T5A4 169 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 ZNF705AQ6ZN79 300 aaPredicted RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 NIT1Q86X76 327 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 KIR2DL5AQ8N109 375 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 DYNAPQ8N1N2 210 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 CIARTQ8N365 385 aaPredicted RBP5.03□□□□□ -1.6
CHD6-202ENST00000373222 GTSF1Q8WW33 167 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 CLEC7AQ9BXN2 247 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 NRN1Q9NPD7 142 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 EPDR1Q9UM22 224 aa5.03□□□□□ -1.6
CHD6-202ENST00000373222 IGHV3-35A0A0C4DH35 117 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 INS-IGF2F8WCM5 200 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 IGKV1-17P01599 117 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 SUB1P53999 127 aaKnown RBP eCLIP5.02□□□□□ -1.61
CHD6-202ENST00000373222 MMDQ15546 238 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 LINC01620Q4KN68 170 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 GAGE13Q4V321 117 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 LCE5AQ5TCM9 118 aa5.02□□□□□ -1.61
CHD6-202ENST00000373222 CD164L2Q6UWJ8 174 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms