RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 C8orf46Q8TAG6 207 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 AJUBAQ96IF1 538 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 FLNBO75369 2602 aaKnown RBP7.63□□□□□ -1.19
SF3A3-201ENST00000373019 RHODO00212 210 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 SLC25A5P05141 298 aaKnown RBP7.63□□□□□ -1.19
SF3A3-201ENST00000373019 THBDP07204 575 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 B3GALT5-AS1P59052 145 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 ERVK-16P61578 105 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 C17orf82Q86X59 251 aaPredicted RBP7.63□□□□□ -1.19
SF3A3-201ENST00000373019 MAPKAPK5-AS1Q8N8E1 139 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 RND1Q92730 232 aa7.63□□□□□ -1.19
SF3A3-201ENST00000373019 A0A1B0GUT8 65 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 HBDP02042 147 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 MPV17P39210 176 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF134P52741 427 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-201ENST00000373019 DCTN5Q9BTE1 182 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 TRBV20-1A0A075B6N2 111 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 PGPA6NDG6 321 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 D6R8Y8 96 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 CXCL13O43927 109 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 NDUFV3P56181 108 aaKnown RBP7.62□□□□□ -1.19
SF3A3-201ENST00000373019 SLC25A48Q6ZT89 311 aaKnown RBP7.62□□□□□ -1.19
SF3A3-201ENST00000373019 Q8IYB0 196 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 AKAP13Q12802 2813 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 SPTBN1Q01082 2364 aaKnown RBP7.62□□□□□ -1.19
SF3A3-201ENST00000373019 C15orf65H3BRN8 121 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 FAM90A1Q86YD7 464 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 CIARTQ8N365 385 aaPredicted RBP7.62□□□□□ -1.19
SF3A3-201ENST00000373019 C12orf49Q9H741 205 aa7.62□□□□□ -1.19
SF3A3-201ENST00000373019 DMXL2Q8TDJ6 3036 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 CELA2AP08217 269 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 YAE1D1Q9NRH1 226 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 PRNDQ9UKY0 176 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 U3KQK5 164 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 WNT9BO14905 357 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 DNPH1O43598 174 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 COL8A1P27658 744 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 GTSCR1Q86UQ5 136 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 DAZAP1Q96EP5 407 aaKnown RBP7.61□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF714Q96N38 554 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 PPDPFQ9H3Y8 114 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 VPREB3Q9UKI3 123 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 DOCK7Q96N67 2140 aa7.61□□□□□ -1.19
SF3A3-201ENST00000373019 PLAUP00749 431 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 IGHV3-13P01766 116 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 UTF1Q5T230 341 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 MBNL2Q5VZF2 373 aaKnown RBP7.6□□□□□ -1.19
SF3A3-201ENST00000373019 FMC1Q96HJ9 113 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 METRNQ9UJH8 293 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 EVI2AP22794 236 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 PLP2Q04941 152 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 TMEM158Q8WZ71 300 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 DEFB126Q9BYW3 111 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 FZR1Q9UM11 496 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 TRAV8-1A0A0A6YYK1 113 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 ARL3P36405 182 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 C10orf113Q5VZT2 155 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 ZNF493Q6ZR52 646 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 PPDPFLQ8WWR9 84 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 S1PR3Q99500 378 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 ENY2Q9NPA8 101 aa7.6□□□□□ -1.19
SF3A3-201ENST00000373019 CD69Q07108 199 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 TAL2Q16559 108 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 DOCK10Q96BY6 2186 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 TRBV7-3A0A075B6L6 115 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 CENPVL3A0A0U1RRI6 287 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 A0A1W2PQM1 296 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 SHISA9B4DS77 424 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 TCRAP04437 139 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 CCL4P13236 92 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 KLF17Q5JT82 389 aaPredicted RBP7.59□□□□□ -1.19
SF3A3-201ENST00000373019 TEN1Q86WV5 123 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 PDPNQ86YL7 162 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 RTL8AQ9BWD3 113 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 OCIAD1Q9NX40 245 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 COX7A2P2O60397 106 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 C2orf83Q53S99 150 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 IFI27L2Q9H2X8 130 aa7.59□□□□□ -1.19
SF3A3-201ENST00000373019 TRAV4A0A0B4J268 109 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 CRLF1O75462 422 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 PLGLB1Q02325 96 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 ZC2HC1BQ5TFG8 222 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 ZFP2Q6ZN57 461 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 LINC00305Q7Z4B0 112 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 TM4SF5O14894 197 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 ZNF688P0C7X2 276 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 RNASE2P10153 161 aaKnown RBP7.58□□□□□ -1.2
SF3A3-201ENST00000373019 HLA-DRB4P13762 266 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 PRCDQ00LT1 54 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 RIGQ13278 110 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 ALKBH6Q3KRA9 238 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 DLX4Q92988 240 aaPredicted RBP7.58□□□□□ -1.2
SF3A3-201ENST00000373019 HLA-DRB4X5D2U9 266 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 PCNX1Q96RV3 2341 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 IGKV1D-37A0A075B6S9 117 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 IGHV5-10-1A0A0J9YXX1 117 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 M0QXV9 152 aa7.58□□□□□ -1.2
SF3A3-201ENST00000373019 AMN1Q8IY45 258 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms