RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 LINC01545Q5VT33 79 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 ZNF747Q9BV97 191 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 MS4A6AQ9H2W1 248 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 ZZEF1O43149 2961 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 TRAV26-1A0A087WT03 109 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 HAX1O00165 279 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 COX8AP10176 69 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 TNFRSF1AP19438 455 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
USP49-201ENST00000373006 C17orf77Q96MU5 243 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 RELNP78509 3460 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 A0A1B0GUT8 65 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 ZNF785A8K8V0 405 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 FAM169BQ8N8A8 192 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 C8orf46Q8TAG6 207 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 AKAP13Q12802 2813 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 IGLV2-11P01706 119 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 GCSHP23434 173 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 IFI27P40305 119 aaPredicted RBP10.9□□□□□ -0.66
USP49-201ENST00000373006 SCGB2A2Q13296 93 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 MRGPRG-AS1Q2M3A8 158 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 VMA21Q3ZAQ7 101 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 FA2HQ7L5A8 372 aa10.9□□□□□ -0.66
USP49-201ENST00000373006 K7ERJ3 54 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 LYPD2Q6UXB3 125 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 ZADH2Q8N4Q0 377 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 CCL17Q92583 94 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 JKAMPQ9P055 326 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 NPIPB6E9PJ23 425 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 OVOL3O00110 214 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 TRGV9Q99603 122 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 TMSB15BA0A087X1C1 80 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 CRYGCP07315 174 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 LCNL1Q6ZST4 164 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 TTTY13Q9BZ97 58 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 RABAC1Q9UI14 185 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 HIGD1AQ9Y241 93 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 MALRD1Q5VYJ5 2156 aa10.89□□□□□ -0.67
USP49-201ENST00000373006 PPIAL4EA0A075B759 164 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 PPIAL4FP0DN26 164 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 TEX36Q5VZQ5 186 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 SRSF8Q9BRL6 282 aaKnown RBP10.88□□□□□ -0.67
USP49-201ENST00000373006 SPTBN1Q01082 2364 aaKnown RBP10.88□□□□□ -0.67
USP49-201ENST00000373006 A0A1B0GV72 72 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 A0A1W2PRD5 423 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 A0A1W2PRF3 423 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 A0A1W2PRM7 423 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 RBP4P02753 201 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 PLA2G2CQ5R387 149 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 SIGMAR1Q99720 223 aa10.88□□□□□ -0.67
USP49-201ENST00000373006 CSN1S1P47710 185 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 RPS20P60866 119 aaKnown RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 CKS1BP61024 79 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 SLC25A39Q9BZJ4 359 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 RPL27AP46776 148 aaKnown RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 TMEM30BQ3MIR4 351 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 SFTA2Q6UW10 78 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 OTORQ9NRC9 128 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 MBD3L4A6NDZ8 208 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 MBD3L3A6NE82 208 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 MBD3L5A6NJ08 208 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 PIP4P2Q8N4L2 257 aa10.87□□□□□ -0.67
USP49-201ENST00000373006 MBD3L2Q8NHZ7 208 aaPredicted RBP10.87□□□□□ -0.67
USP49-201ENST00000373006 CD40P25942 277 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 ATP5G2Q06055 141 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 RIGQ13278 110 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 LRBAP50851 2863 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 AKAP6Q13023 2319 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 FCER1GP30273 86 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 CRIP1P50238 77 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 FAM215AQ9Y5M1 114 aa10.86□□□□□ -0.67
USP49-201ENST00000373006 TLN1Q9Y490 2541 aaKnown RBP10.86□□□□□ -0.67
USP49-201ENST00000373006 A0A096LNJ9 63 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 A6NDN8 102 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 D6R8Y8 96 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 M0R3E3 92 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 FABP2P12104 132 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 TMEM213A2RRL7 107 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 K7EP34 96 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 K7EQM0 130 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 FGF6P10767 208 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
USP49-201ENST00000373006 CRYBA4P53673 196 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 CACNG7P62955 275 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 PSG3Q16557 428 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 AMTNQ6UX39 209 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 NPFFR1Q9GZQ6 430 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 SVEP1Q4LDE5 3571 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 HSD52Q0P140 79 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 ETDBQ3ZM63 59 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 TMEM133Q9H2Q1 129 aa10.85□□□□□ -0.67
USP49-201ENST00000373006 C9orf118A6NHY6 69 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 NDUFB3O43676 98 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 AMN1Q8IY45 258 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 C8orf49Q96NF6 230 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 S4R3C0 116 aa10.84□□□□□ -0.67
USP49-201ENST00000373006 FCGR2BP31994 310 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms