RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 SAMD13Q5VXD3 122 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 TMEM61Q8N0U2 210 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 GPR61Q9BZJ8 451 aa11.93□□□□□ -0.5
TMEM53-204ENST00000372243 TRBV19A0A075B6N1 114 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 TRAV2A0A0B4J234 112 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 ZNF253O75346 499 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 PAFAH1B2P68402 229 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 TMPRSS5Q9H3S3 457 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 IQCF2Q8IXL9 164 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 DCANP1Q8TF63 244 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 SPAG8Q99932 426 aaPredicted RBP11.92□□□□□ -0.5
TMEM53-204ENST00000372243 SLC50A1Q9BRV3 221 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 MS4A6AQ9H2W1 248 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 ARL2-SNX15V9GYD0 113 aa11.92□□□□□ -0.5
TMEM53-204ENST00000372243 A0A1B0GV50 99 aa11.91□□□□□ -0.5
TMEM53-204ENST00000372243 CCL20P78556 96 aa11.91□□□□□ -0.5
TMEM53-204ENST00000372243 LCN12Q6JVE5 192 aa11.91□□□□□ -0.5
TMEM53-204ENST00000372243 LYPD1Q8N2G4 141 aa11.91□□□□□ -0.5
TMEM53-204ENST00000372243 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
TMEM53-204ENST00000372243 SELENOKQ9Y6D0 94 aa11.91□□□□□ -0.5
TMEM53-204ENST00000372243 SOCS3O14543 225 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 NDUFB4O95168 129 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 IGLL1P15814 213 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 PSG9Q00887 426 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 BLNKQ8WV28 456 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 CLEC5AQ9NY25 188 aa11.9□□□□□ -0.5
TMEM53-204ENST00000372243 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
TMEM53-204ENST00000372243 A0A1W2PRE2 83 aa11.89□□□□□ -0.51
TMEM53-204ENST00000372243 K7EQG2 157 aa11.89□□□□□ -0.51
TMEM53-204ENST00000372243 DNASE2O00115 360 aaPredicted RBP11.89□□□□□ -0.51
TMEM53-204ENST00000372243 ISLRO14498 428 aa11.89□□□□□ -0.51
TMEM53-204ENST00000372243 SNRPCP09234 159 aaKnown RBP11.89□□□□□ -0.51
TMEM53-204ENST00000372243 MANBALQ9NQG1 85 aa11.89□□□□□ -0.51
TMEM53-204ENST00000372243 ZNF331Q9NQX6 463 aaPredicted RBP11.89□□□□□ -0.51
TMEM53-204ENST00000372243 IZUMO1RA6ND01 250 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 OR4C46A6NHA9 309 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 H3BTX0 84 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 SLC17A3O00476 420 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 IFNA1P01562 189 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
TMEM53-204ENST00000372243 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 NKX6-2Q9C056 277 aaPredicted RBP11.88□□□□□ -0.51
TMEM53-204ENST00000372243 CMYA5Q8N3K9 4069 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 RANP62826 216 aaKnown RBP11.88□□□□□ -0.51
TMEM53-204ENST00000372243 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 GNG13Q9P2W3 67 aa11.88□□□□□ -0.51
TMEM53-204ENST00000372243 ZNF256Q9Y2P7 627 aaPredicted RBP11.88□□□□□ -0.51
TMEM53-204ENST00000372243 FAM74A7A6NL05 159 aa11.87□□□□□ -0.51
TMEM53-204ENST00000372243 ID1P41134 155 aa11.87□□□□□ -0.51
TMEM53-204ENST00000372243 TXNDC17Q9BRA2 123 aa11.87□□□□□ -0.51
TMEM53-204ENST00000372243 Q9H3A6 140 aa11.87□□□□□ -0.51
TMEM53-204ENST00000372243 AAMDCQ9H7C9 122 aa11.87□□□□□ -0.51
TMEM53-204ENST00000372243 TRAV8-2A0A0B4J237 113 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 PAGE4O60829 102 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 TFPI2P48307 235 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 UBE2G2P60604 165 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 WFDC3Q8IUB2 231 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 FAM210AQ96ND0 272 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
TMEM53-204ENST00000372243 YTHDF2Q9Y5A9 579 aaKnown RBP11.86□□□□□ -0.51
TMEM53-204ENST00000372243 BCL2P10415 239 aa11.85□□□□□ -0.51
TMEM53-204ENST00000372243 SNRPD3P62318 126 aaKnown RBP11.85□□□□□ -0.51
TMEM53-204ENST00000372243 GUCA2BQ16661 112 aa11.85□□□□□ -0.51
TMEM53-204ENST00000372243 BEAN1Q3B7T3 259 aa11.85□□□□□ -0.51
TMEM53-204ENST00000372243 ARL6IP6Q8N6S5 226 aa11.85□□□□□ -0.51
TMEM53-204ENST00000372243 MRPL53Q96EL3 112 aaKnown RBP11.85□□□□□ -0.51
TMEM53-204ENST00000372243 MED9Q9NWA0 146 aa11.85□□□□□ -0.51
TMEM53-204ENST00000372243 PGPA6NDG6 321 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 GGTLC3B5MD39 225 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 CMC4P56277 68 aaPredicted RBP11.84□□□□□ -0.51
TMEM53-204ENST00000372243 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
TMEM53-204ENST00000372243 ICAM4Q14773 271 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 PSG3Q16557 428 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 CCDC28AQ8IWP9 274 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 EXOC3-AS1Q8N2X6 119 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 FAM110AQ9BQ89 295 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 TCEAL7Q9BRU2 100 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
TMEM53-204ENST00000372243 VAX2Q9UIW0 290 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 PKD1L1Q8TDX9 2849 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 LOC102723971A0A1B0GUV8 181 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 RBFOX3A6NFN3 312 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 HAGHQ16775 308 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 OXLD1Q5BKU9 147 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 CST9LP1Q5W188 147 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 RXFP4Q8TDU9 374 aa11.84□□□□□ -0.51
TMEM53-204ENST00000372243 NDUFS6O75380 124 aaKnown RBP11.83□□□□□ -0.52
TMEM53-204ENST00000372243 MEF2BQ02080 365 aaPredicted RBP11.83□□□□□ -0.52
TMEM53-204ENST00000372243 EGFEM1PQ0D2K5 195 aa11.83□□□□□ -0.52
TMEM53-204ENST00000372243 ZNF506Q5JVG8 444 aa11.83□□□□□ -0.52
TMEM53-204ENST00000372243 IGFL4Q6B9Z1 124 aa11.83□□□□□ -0.52
TMEM53-204ENST00000372243 FAM24BQ8N5W8 94 aa11.83□□□□□ -0.52
TMEM53-204ENST00000372243 C5orf17Q8NAS9 161 aa11.83□□□□□ -0.52
TMEM53-204ENST00000372243 C11orf94C9JXX5 98 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 ZNF688P0C7X2 276 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 HLA-DMBP28068 263 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 ATP5G3P48201 142 aa11.82□□□□□ -0.52
TMEM53-204ENST00000372243 SAMD5Q5TGI4 173 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms