RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 APRG1Q8IVJ8 170 aa12.16□□□□□ -0.46
TMEM53-203ENST00000372242 BAP18Q8IXM2 172 aa12.16□□□□□ -0.46
TMEM53-203ENST00000372242 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
TMEM53-203ENST00000372242 PCNPQ8WW12 178 aaKnown RBP12.16□□□□□ -0.46
TMEM53-203ENST00000372242 RPRMQ9NS64 109 aa12.16□□□□□ -0.46
TMEM53-203ENST00000372242 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
TMEM53-203ENST00000372242 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
TMEM53-203ENST00000372242 TPT1P13693 172 aaKnown RBP12.15□□□□□ -0.46
TMEM53-203ENST00000372242 DEFB121Q5J5C9 76 aa12.15□□□□□ -0.46
TMEM53-203ENST00000372242 IGFL4Q6B9Z1 124 aa12.15□□□□□ -0.46
TMEM53-203ENST00000372242 MAP6D1Q9H9H5 199 aa12.15□□□□□ -0.46
TMEM53-203ENST00000372242 SOCS3O14543 225 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 MBP02144 154 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 IGLC2P0DOY2 106 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 DEFB131AP59861 70 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 TMEM41BQ5BJD5 291 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 ALKAL2Q6UX46 152 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 STOML3Q8TAV4 291 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 MRAPQ8TCY5 172 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 TMED6Q8WW62 240 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 PLA2G2EQ9NZK7 142 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 OR7C2O60412 319 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 OR10J4P0C629 311 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 IGHV4-30-4P0DP06 118 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 CDC34P49427 236 aaPredicted RBP12.14□□□□□ -0.47
TMEM53-203ENST00000372242 EIF5AP63241 154 aaKnown RBP12.14□□□□□ -0.47
TMEM53-203ENST00000372242 PSMG4Q5JS54 123 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 AKR1C8PQ5T2L2 129 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 C16orf92Q96LL3 132 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 HRH4Q9H3N8 390 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 ZNF586Q9NXT0 402 aa12.14□□□□□ -0.47
TMEM53-203ENST00000372242 A0A087X0K7 114 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 SEC11BP0C7V7 166 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 MEOX2P50222 304 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 RAB24Q969Q5 203 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 ZNF503Q96F45 646 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 LINC00052Q96N35 136 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 OR51M1Q9H341 326 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 TMEM14CQ9P0S9 112 aa12.13□□□□□ -0.47
TMEM53-203ENST00000372242 SLC17A3O00476 420 aa12.12□□□□□ -0.47
TMEM53-203ENST00000372242 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
TMEM53-203ENST00000372242 RNF182Q8N6D2 247 aa12.12□□□□□ -0.47
TMEM53-203ENST00000372242 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
TMEM53-203ENST00000372242 PHYHIPLQ96FC7 376 aa12.12□□□□□ -0.47
TMEM53-203ENST00000372242 PAXXQ9BUH6 204 aa12.12□□□□□ -0.47
TMEM53-203ENST00000372242 TRAV8-2A0A0B4J237 113 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 ISLRO14498 428 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 HLA-DMBP28068 263 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 ID1P41134 155 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 PSMB3P49720 205 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 FHITP49789 147 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 TAS2R45P59539 299 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 DEFB1P60022 68 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 ZNF726P1Q15940 193 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 KHDC3LQ587J8 217 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 IQCF2Q8IXL9 164 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 EIF4E3Q8N5X7 224 aaKnown RBP12.11□□□□□ -0.47
TMEM53-203ENST00000372242 C20orf173Q96LM9 149 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 FAM110AQ9BQ89 295 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 PRB4P10163 310 aaPredicted RBP12.11□□□□□ -0.47
TMEM53-203ENST00000372242 HIST1H1EP10412 219 aaKnown RBP12.11□□□□□ -0.47
TMEM53-203ENST00000372242 LCN15Q6UWW0 184 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 RNF141Q8WVD5 230 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 SAT2Q96F10 170 aaPredicted RBP12.11□□□□□ -0.47
TMEM53-203ENST00000372242 ACTR3CQ9C0K3 210 aaPredicted RBP12.11□□□□□ -0.47
TMEM53-203ENST00000372242 TUBA4BQ9H853 241 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 SRD5A3Q9H8P0 318 aa12.11□□□□□ -0.47
TMEM53-203ENST00000372242 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
TMEM53-203ENST00000372242 SCO1O75880 301 aa12.1□□□□□ -0.47
TMEM53-203ENST00000372242 CMC4P56277 68 aaPredicted RBP12.1□□□□□ -0.47
TMEM53-203ENST00000372242 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
TMEM53-203ENST00000372242 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 ARL14EPLP0DKL9 152 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 UBE2L3P68036 154 aaKnown RBP12.09□□□□□ -0.47
TMEM53-203ENST00000372242 GUK1Q16774 197 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 KNCNA6PVL3 124 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 NDUFB4O95168 129 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 FRMD6-AS1P0C7T7 363 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 SAMD13Q5VXD3 122 aa12.09□□□□□ -0.47
TMEM53-203ENST00000372242 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
TMEM53-203ENST00000372242 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
TMEM53-203ENST00000372242 UMAD1C9J7I0 102 aa12.08□□□□□ -0.48
TMEM53-203ENST00000372242 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
TMEM53-203ENST00000372242 PQLC2Q6ZP29 291 aa12.08□□□□□ -0.48
TMEM53-203ENST00000372242 FAM213BQ8TBF2 198 aa12.08□□□□□ -0.48
TMEM53-203ENST00000372242 SLC50A1Q9BRV3 221 aa12.08□□□□□ -0.48
TMEM53-203ENST00000372242 CTXND1A0A1B0GTU2 59 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 KRBOX1C9JBD0 128 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 F6UB75 175 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 GDF5OSQ5U4N7 250 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 EIF5AL1Q6IS14 154 aaKnown RBP12.07□□□□□ -0.48
TMEM53-203ENST00000372242 A8MZ25 164 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
TMEM53-203ENST00000372242 EXOC3-AS1Q8N2X6 119 aa12.07□□□□□ -0.48
TMEM53-203ENST00000372242 AGRNO00468 2067 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms