RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 PLNP26678 52 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 LHFPL1Q86WI0 220 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 GGTLC1Q9BX51 225 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 RSPO3Q9BXY4 272 aaPredicted RBP7.93□□□□□ -1.14
COL4A6-202ENST00000372216 PRDM13Q9H4Q3 707 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 ZDBF2Q9HCK1 2354 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 TRAV9-1A0A075B6T8 112 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 SH2D1AO60880 128 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 QRFPP83859 136 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 ATP5L2Q7Z4Y8 100 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 MCRIP2Q9BUT9 160 aaKnown RBP7.93□□□□□ -1.14
COL4A6-202ENST00000372216 D6R8Y8 96 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 AZU1P20160 251 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 MORN3Q6PF18 240 aaPredicted RBP7.93□□□□□ -1.14
COL4A6-202ENST00000372216 Q8TCH9 128 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
COL4A6-202ENST00000372216 ARID1AO14497 2285 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 STAG3L3P0CL85 134 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 ATP6V0BQ99437 205 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 FANCMQ8IYD8 2048 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 LYZL1Q6UWQ5 148 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 Q6ZQT7 251 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 CARHSP1Q9Y2V2 147 aaKnown RBP7.92□□□□□ -1.14
COL4A6-202ENST00000372216 PLXNA2O75051 1894 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 ESDP10768 282 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.92□□□□□ -1.14
COL4A6-202ENST00000372216 RPL18AQ02543 176 aaKnown RBP7.92□□□□□ -1.14
COL4A6-202ENST00000372216 FHL1Q13642 323 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 PTPRDP23468 1912 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 NUP210Q8TEM1 1887 aaPredicted RBP7.92□□□□□ -1.14
COL4A6-202ENST00000372216 FAM215AQ9Y5M1 114 aa7.92□□□□□ -1.14
COL4A6-202ENST00000372216 SERF1AO75920 110 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 GAGE2AQ6NT46 116 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 NIT1Q86X76 327 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 HS3ST6Q96QI5 342 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ATP6V0E1O15342 81 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 GHRHP01286 108 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 DDTP30046 118 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 RNASE13Q5GAN3 156 aaKnown RBP7.91□□□□□ -1.14
COL4A6-202ENST00000372216 WISP1O95388 367 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV1-39P01597 117 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV1D-39P04432 117 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ATXN8Q156A1 80 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 MYLKQ15746 1914 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 A0A087WWC5 75 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 F2Z2F3 143 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 LEPROTO15243 131 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 CFHR2P36980 270 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
COL4A6-202ENST00000372216 C9orf139Q6ZV77 190 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 RASL10AQ92737 203 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ZNF503-AS2A6NEH8 195 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 IGKV1-16P04430 117 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ORMDL2Q53FV1 153 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 DUX4L9Q6RFH8 374 aaPredicted RBP7.91□□□□□ -1.14
COL4A6-202ENST00000372216 OCC1Q8TAD7 63 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ESM1Q9NQ30 184 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 ERG28Q9UKR5 140 aa7.91□□□□□ -1.14
COL4A6-202ENST00000372216 PMVKQ15126 192 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 Q6ZR03 302 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 OSTCQ9NRP0 149 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 RBMY1FQ15415 496 aaKnown RBP7.9□□□□□ -1.14
COL4A6-202ENST00000372216 NMSQ5H8A3 153 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 MTURNQ8N3F0 131 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 C1QTNF4Q9BXJ3 329 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 AHCTF1Q8WYP5 2266 aa7.9□□□□□ -1.14
COL4A6-202ENST00000372216 J3QLI3 93 aa7.9□□□□□ -1.15
COL4A6-202ENST00000372216 K7EM74 188 aa7.9□□□□□ -1.15
COL4A6-202ENST00000372216 ETV2O00321 342 aaPredicted RBP7.9□□□□□ -1.15
COL4A6-202ENST00000372216 APOC4P55056 127 aa7.9□□□□□ -1.15
COL4A6-202ENST00000372216 ZNF138P52744 262 aa7.9□□□□□ -1.15
COL4A6-202ENST00000372216 NRGNQ92686 78 aa7.9□□□□□ -1.15
COL4A6-202ENST00000372216 G3V318 75 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 VWC2Q2TAL6 325 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 DEFB136Q30KP8 78 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 FAM120AOSQ5T036 256 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 C5orf30Q96GV9 206 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 DAZ1Q9NQZ3 744 aaKnown RBP7.89□□□□□ -1.15
COL4A6-202ENST00000372216 MLANAQ16655 118 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 PRIMA1Q86XR5 153 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 C8orf49Q96NF6 230 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 WT1P19544 449 aaPredicted RBP7.89□□□□□ -1.15
COL4A6-202ENST00000372216 TRAV9-2A0A087WT02 112 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 NTF4P34130 210 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 TAL2Q16559 108 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 OCIAD2Q56VL3 154 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 REG4Q9BYZ8 158 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 RP1P56715 2156 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 TRAV8-1A0A0A6YYK1 113 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 TRAV12-1A0A0B4J245 112 aa7.89□□□□□ -1.15
COL4A6-202ENST00000372216 SRSF8Q9BRL6 282 aaKnown RBP7.89□□□□□ -1.15
COL4A6-202ENST00000372216 RNASE2P10153 161 aaKnown RBP7.88□□□□□ -1.15
COL4A6-202ENST00000372216 Q6ZS49 121 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 ANAPC13Q9BS18 74 aa7.88□□□□□ -1.15
COL4A6-202ENST00000372216 ANAPC1Q9H1A4 1944 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms