RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 DEFB130BP0DP73 79 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 DEFB130AP0DP74 79 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 C1orf147Q96MC9 270 aaPredicted RBP11.86□□□□□ -0.51
NDC1-201ENST00000371429 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
NDC1-201ENST00000371429 A0A1W2PNU3 283 aaPredicted RBP11.85□□□□□ -0.51
NDC1-201ENST00000371429 GAGE10A6NGK3 116 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 IGHV2-5P01817 119 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 SHANK2-AS3Q9BTD1 123 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 PRO3102Q9H379 93 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 TRAV1-1A0A0B4J248 108 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 FNDC10F2Z333 226 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 SRSF3P84103 164 aaKnown RBP11.85□□□□□ -0.51
NDC1-201ENST00000371429 C22orf46C9J442 243 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 MMP23AO75900 390 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 ZNF876PQ49A33 203 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 TRAV8-1A0A0A6YYK1 113 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
NDC1-201ENST00000371429 HBDP02042 147 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 NDUFA4L2Q9NRX3 87 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 CFPP27918 469 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 CYTL1Q9NRR1 136 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 C1QL4Q86Z23 238 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 PRDM13Q9H4Q3 707 aa11.84□□□□□ -0.51
NDC1-201ENST00000371429 YPEL3P61236 119 aaPredicted RBP11.83□□□□□ -0.51
NDC1-201ENST00000371429 MED13Q9UHV7 2174 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 XCL2Q9UBD3 114 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 SERF1AO75920 110 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 LYZL1Q6UWQ5 148 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 DKK1O94907 266 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 LINC00614P0C842 121 aa11.83□□□□□ -0.52
NDC1-201ENST00000371429 ATP5L2Q7Z4Y8 100 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 SPRY4Q9C004 299 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 SNAI2O43623 268 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 SH2D1AO60880 128 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 IGHV2-70P01814 119 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 ADORA2A-AS1P86434 159 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 TCTEX1D4Q5JR98 221 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 TRBV7-9A0A0J9YWB2 115 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 PDE6HQ13956 83 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 DEFB112Q30KQ8 113 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 DERL1Q9BUN8 251 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 PLXND1Q9Y4D7 1925 aa11.82□□□□□ -0.52
NDC1-201ENST00000371429 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
NDC1-201ENST00000371429 ADMP35318 185 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 ELANEP08246 267 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 MST1LQ2TV78 715 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 PLA2G5P39877 138 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 ATRAIDQ6UW56 229 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 GNB1LQ9BYB4 327 aa11.81□□□□□ -0.52
NDC1-201ENST00000371429 NCR2O95944 276 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 ZNF134P52741 427 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 DIAPH2-AS1Q14236 149 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 C14orf144Q96I85 54 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 DPH3P1Q9H4G8 78 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 CBY1Q9Y3M2 126 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 IGHV4-30-2A0A087WSY4 118 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 CTSZQ9UBR2 303 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 PSCAO43653 123 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 IGHV4-59P01825 116 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 TMEM170AQ8WVE7 144 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 VPREB3Q9UKI3 123 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 LINC01549A6NIU2 74 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.8□□□□□ -0.52
NDC1-201ENST00000371429 ERCC8Q13216 396 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 LINC01551Q86U37 167 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 C14orf178Q8N769 122 aaPredicted RBP11.8□□□□□ -0.52
NDC1-201ENST00000371429 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 RNF138Q8WVD3 245 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 MYLKQ15746 1914 aa11.8□□□□□ -0.52
NDC1-201ENST00000371429 TPSG1Q9NRR2 321 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 LOC102724200A0A096LPH7 203 aaPredicted RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 AMBPP02760 352 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 FAM120AOSQ5T036 256 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 PLCE1Q9P212 2302 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 E9PQ18 207 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 NDUFA4O00483 81 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 RBMY1BA6NDE4 496 aaKnown RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 RBMY1EA6NEQ0 496 aaKnown RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 RBMY1DP0C7P1 496 aaKnown RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 RBMY1A1P0DJD3 496 aaKnown RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 RBMY1CP0DJD4 496 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 DDTP30046 118 aa11.79□□□□□ -0.52
NDC1-201ENST00000371429 MRPL16Q9NX20 251 aaKnown RBP11.79□□□□□ -0.52
NDC1-201ENST00000371429 IGHV4-39P01824 125 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 ST6GALNAC6Q969X2 333 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 CCDC168Q8NDH2 2452 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 SPINK13Q1W4C9 94 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 RNF182Q8N6D2 247 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 NRGNQ92686 78 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 APOMO95445 188 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 OR5A1Q8NGJ0 315 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 DEFB104AQ8WTQ1 72 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 DPM2O94777 84 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 SCGB1A1P11684 91 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 WT1-ASQ06250 92 aa11.78□□□□□ -0.52
NDC1-201ENST00000371429 D6R8Y8 96 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms