RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 PMVKQ15126 192 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 FAM106AQ4KMX7 169 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 FAM74A1Q5RGS3 127 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 Q8N2B8 174 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 TMEM167AQ8TBQ9 72 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 SPACA5Q96QH8 159 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 LSM5Q9Y4Y9 91 aaKnown RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 ZZEF1O43149 2961 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 LINC00473A8K010 186 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 ENSAO43768 121 aaKnown RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 RAB5CP51148 216 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 ERVFC1-1P60608 527 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 SAMD10Q9BYL1 202 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 TMEM106BQ9NUM4 274 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 OR5AC2Q9NZP5 309 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 C15orf62A8K5M9 175 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 PHOX2AO14813 284 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 YPEL3P61236 119 aaPredicted RBP2.95□□□□□ -1.94
MCF2-203ENST00000370576 SLC35G3Q8N808 338 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 OR10J6PQ8NGY7 276 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 IL1F10Q8WWZ1 152 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 PDCD10Q9BUL8 212 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 NDUFA4L2Q9NRX3 87 aa2.95□□□□□ -1.94
MCF2-203ENST00000370576 TRGV11A0A075B6L2 103 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 C9orf118A6NHY6 69 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 ZFP92A6NM28 416 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 COLCA2A8K830 154 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 OVOL1O14753 267 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 OR5AC1P0C628 307 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 FGF7P21781 194 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 FCGR2CP31995 323 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 THBS3P49746 956 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 C2orf83Q53S99 150 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 Q6ZSV7 163 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 CHMP1BQ7LBR1 199 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 PDPNQ86YL7 162 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 PPP1R1CQ8WVI7 109 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 ITLN1Q8WWA0 313 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 URB1-AS1Q96HZ7 61 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 SSBP3Q9BWW4 388 aaPredicted RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 CALYQ9NYX4 217 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 ALPK2Q86TB3 2170 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 CCDC179H3BU77 68 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 PSMB8P28062 276 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 TMEM267Q0VDI3 215 aaPredicted RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 MINOS1Q5TGZ0 78 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 OR8I2Q8N0Y5 310 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 OSR1Q8TAX0 266 aaPredicted RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 RXFP4Q8TDU9 374 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 RTN4IP1Q8WWV3 396 aaPredicted RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 NABP2Q9BQ15 211 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 PARP12Q9H0J9 701 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 RPRMQ9NS64 109 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 MINOS1-NBL1R4GNA1 71 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 SETXQ7Z333 2677 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 J3QQQ9 107 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 OR7C2O60412 319 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 NCR2O95944 276 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 DAZ2Q13117 558 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 DAZ4Q86SG3 579 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 ZNF525Q8N782 197 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 C5orf17Q8NAS9 161 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 LRRC29Q8WV35 223 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 IGF2BP2-AS1Q96M15 143 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 RBKSQ9H477 322 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 TUBA4BQ9H853 241 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 TAF9BQ9HBM6 251 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 DAZ1Q9NQZ3 744 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 DAZ3Q9NR90 486 aaKnown RBP2.94□□□□□ -1.94
MCF2-203ENST00000370576 XCL2Q9UBD3 114 aa2.94□□□□□ -1.94
MCF2-203ENST00000370576 DNAH1Q9P2D7 4330 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 CFAP46Q8IYW2 2715 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 IGLV9-49A0A0B4J1Y8 123 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 IGHV4-28A0A0C4DH34 117 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 C19orf84I3L1E1 186 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 YIF1AO95070 293 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 IGHV1-8P0DP01 117 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 EGR2P11161 476 aaPredicted RBP2.93□□□□□ -1.94
MCF2-203ENST00000370576 LPAR6P43657 344 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 BLNKQ8WV28 456 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 PRADC1Q9BSG0 188 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 NAT8Q9UHE5 227 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 TRAPPC2LQ9UL33 140 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 FBN2P35556 2912 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 ZNF407Q9C0G0 2248 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 UPK2O00526 184 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 CRYBA1P05813 215 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 IGLC6P0CF74 106 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 DSCR9P59020 149 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 PRCDQ00LT1 54 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 C3orf22Q8N5N4 141 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 MUCL1Q96DR8 90 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 ZNF702PQ9H963 129 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 CCL28Q9NRJ3 127 aa2.93□□□□□ -1.94
MCF2-203ENST00000370576 ZNF469Q96JG9 3925 aaPredicted RBP2.93□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12BA1L429 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12HA6NDE8 117 aa2.92□□□□□ -1.94
MCF2-203ENST00000370576 GAGE12JA6NER3 117 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms