RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 OVOL3O00110 214 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 HAX1O00165 279 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 FGF6P10767 208 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 GLRXP35754 106 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 RPS20P60866 119 aaKnown RBP9.78□□□□□ -0.84
PHGDH-201ENST00000369407 ZNF474Q6S9Z5 364 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-201ENST00000369407 FAM222BQ8WU58 562 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 NPFFR1Q9GZQ6 430 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 ZNF492Q9P255 531 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 S4R3C0 116 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 A0A096LNJ9 63 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 D6R8Y8 96 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 CT83Q5H943 113 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 TTTY13Q9BZ97 58 aa9.78□□□□□ -0.84
PHGDH-201ENST00000369407 SOX21Q9Y651 276 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-201ENST00000369407 GAGE12HA6NDE8 117 aa9.77□□□□□ -0.84
PHGDH-201ENST00000369407 M0R3E3 92 aa9.77□□□□□ -0.84
PHGDH-201ENST00000369407 IGHG3P01860 377 aa9.77□□□□□ -0.84
PHGDH-201ENST00000369407 RBP4P02753 201 aa9.77□□□□□ -0.84
PHGDH-201ENST00000369407 ZADH2Q8N4Q0 377 aa9.77□□□□□ -0.84
PHGDH-201ENST00000369407 CSN1S1P47710 185 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 LYPD2Q6UXB3 125 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 AMN1Q8IY45 258 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 PIEZO2Q9H5I5 2752 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 C9orf118A6NHY6 69 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 UFSP1Q6NVU6 142 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 C18orf15Q96N68 181 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 C8orf49Q96NF6 230 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 GFRA4Q9GZZ7 299 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 HIGD1AQ9Y241 93 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 LINC00312Q9Y6C7 94 aa9.77□□□□□ -0.85
PHGDH-201ENST00000369407 K7EP34 96 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 CNIH1O95406 144 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 GATA3P23771 443 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 CRIP1P50238 77 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 MRGPRG-AS1Q2M3A8 158 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 IGFBPL1Q8WX77 278 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 NPIPB6E9PJ23 425 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 CCDC144NLQ6NUI1 221 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 C8orf46Q8TAG6 207 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 SIGLEC8Q9NYZ4 499 aa9.76□□□□□ -0.85
PHGDH-201ENST00000369407 TM4SF5O14894 197 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 APOBEC3AP31941 199 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-201ENST00000369407 SEC11AP67812 179 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 ETDBQ3ZM63 59 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 SHISA2Q6UWI4 295 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 VSTM2AQ8TAG5 236 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 CCL17Q92583 94 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 SLC25A39Q9BZJ4 359 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-201ENST00000369407 FABP2P12104 132 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 RIGQ13278 110 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 ANXA2RQ3ZCQ2 193 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 DKK2Q9UBU2 259 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 A1L4Q6 167 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 GCSHP23434 173 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 PSG3Q16557 428 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 VMA21Q3ZAQ7 101 aa9.75□□□□□ -0.85
PHGDH-201ENST00000369407 BCL6BQ8N143 479 aaPredicted RBP9.75□□□□□ -0.85
PHGDH-201ENST00000369407 NBASA2RRP1 2371 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 IGLV3-9A0A075B6K5 115 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 A6NDN8 102 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 K7ERJ3 54 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 CD59P13987 128 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 TRGV9Q99603 122 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 TMEM133Q9H2Q1 129 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 LINC00574Q9H8X3 128 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 INSIG2Q9Y5U4 225 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 GATA4P43694 442 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 RPL27AP46776 148 aaKnown RBP9.74□□□□□ -0.85
PHGDH-201ENST00000369407 TIMM23BQ5SRD1 257 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
PHGDH-201ENST00000369407 H3BRM9 83 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 PPIFP30405 207 aaKnown RBP9.73□□□□□ -0.85
PHGDH-201ENST00000369407 WFDC2Q14508 124 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 SMAD7O15105 426 aaKnown RBP9.73□□□□□ -0.85
PHGDH-201ENST00000369407 CRYGCP07315 174 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 PRELID3AQ96N28 172 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 PSG8Q9UQ74 426 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 ARPC1AQ92747 370 aa9.73□□□□□ -0.85
PHGDH-201ENST00000369407 FCGR2BP31994 310 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-201ENST00000369407 AMTNQ6UX39 209 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 NEGR1Q7Z3B1 354 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 BOD1L2Q8IYS8 172 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 INS-IGF2F8WCM5 200 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 ZNF414Q96IQ9 312 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 FBXL15Q9H469 300 aa9.72□□□□□ -0.85
PHGDH-201ENST00000369407 GAS8-AS1O95177 125 aa9.71□□□□□ -0.85
PHGDH-201ENST00000369407 INSL3P51460 131 aa9.71□□□□□ -0.85
PHGDH-201ENST00000369407 CD300EQ496F6 205 aaPredicted RBP9.71□□□□□ -0.85
PHGDH-201ENST00000369407 RASL11BQ9BPW5 248 aa9.71□□□□□ -0.85
PHGDH-201ENST00000369407 PRO3102Q9H379 93 aa9.71□□□□□ -0.85
PHGDH-201ENST00000369407 MALRD1Q5VYJ5 2156 aa9.71□□□□□ -0.85
PHGDH-201ENST00000369407 KLF17Q5JT82 389 aaPredicted RBP9.71□□□□□ -0.86
PHGDH-201ENST00000369407 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms