RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FAM74A3Q4VXF1 159 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 C1QL4Q86Z23 238 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 LYPD1Q8N2G4 141 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 C11orf44Q8N8P7 122 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 OR11H1Q8NG94 326 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 CITED2Q99967 270 aaPredicted RBP18.2■□□□□ 0.5
SNX3-203ENST00000368979 SMIM7Q9BQ49 75 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 DERL1Q9BUN8 251 aa18.2■□□□□ 0.5
SNX3-203ENST00000368979 KLF5Q13887 457 aaPredicted RBP18.19■□□□□ 0.5
SNX3-203ENST00000368979 ZNF674Q2M3X9 581 aa18.19■□□□□ 0.5
SNX3-203ENST00000368979 NIPSNAP3BQ9BS92 247 aa18.19■□□□□ 0.5
SNX3-203ENST00000368979 SMPXQ9UHP9 88 aa18.19■□□□□ 0.5
SNX3-203ENST00000368979 TSSC4Q9Y5U2 329 aaPredicted RBP18.19■□□□□ 0.5
SNX3-203ENST00000368979 TMEM213A2RRL7 107 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 ZNF253O75346 499 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 SYNJ2BPP57105 145 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 C8orf86Q6ZUL3 223 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 OR1N2Q8NGR9 330 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 C2CD4CQ8TF44 421 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 GRAMD2BQ96HH9 432 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 SETD2Q9BYW2 2564 aaPredicted RBP18.18■□□□□ 0.5
SNX3-203ENST00000368979 SNAPINO95295 136 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 SLC25A5P05141 298 aaKnown RBP18.18■□□□□ 0.5
SNX3-203ENST00000368979 SLURP1P55000 103 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 ATRAIDQ6UW56 229 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 EXOC3-AS1Q8N2X6 119 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 C5orf17Q8NAS9 161 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 RHPN1-AS1Q9BWJ2 59 aa18.18■□□□□ 0.5
SNX3-203ENST00000368979 CHEK1O14757 476 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 EDN2P20800 178 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 CLRN3Q8NCR9 226 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 DPF1Q92782 380 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 HIST1H2BAQ96A08 127 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 EPDR1Q9UM22 224 aa18.17■□□□□ 0.5
SNX3-203ENST00000368979 A0A1B0GUS0 222 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 ZNF785A8K8V0 405 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 PEX7O00628 323 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 GNG5P63218 68 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 PSG9Q00887 426 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 TVP23CQ96ET8 276 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 NAT8Q9UHE5 227 aa18.16■□□□□ 0.5
SNX3-203ENST00000368979 NF1P21359 2839 aa18.15■□□□□ 0.5
SNX3-203ENST00000368979 MEOX2P50222 304 aa18.15■□□□□ 0.5
SNX3-203ENST00000368979 DUX3Q96PT4 197 aa18.15■□□□□ 0.5
SNX3-203ENST00000368979 SDF2L1Q9HCN8 221 aa18.15■□□□□ 0.5
SNX3-203ENST00000368979 ZNF331Q9NQX6 463 aaPredicted RBP18.15■□□□□ 0.5
SNX3-203ENST00000368979 RPL35P42766 123 aaKnown RBP18.14■□□□□ 0.49
SNX3-203ENST00000368979 FHL3Q13643 280 aa18.14■□□□□ 0.49
SNX3-203ENST00000368979 RAX2Q96IS3 184 aa18.14■□□□□ 0.49
SNX3-203ENST00000368979 TRBV20OR9-2A0A075B6H5 130 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 A0A1W2PRX2 142 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 AKR1C3P42330 323 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 KRTAP10-3P60369 221 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 PNRC1Q12796 327 aaPredicted RBP18.13■□□□□ 0.49
SNX3-203ENST00000368979 TMEM241Q24JQ0 296 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 AWAT1Q58HT5 328 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 ATG101Q9BSB4 218 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 AAMDCQ9H7C9 122 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 TCRAP04437 139 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 BMI1P35226 326 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.13■□□□□ 0.49
SNX3-203ENST00000368979 SLC50A1Q9BRV3 221 aa18.13■□□□□ 0.49
SNX3-203ENST00000368979 ADARB2-AS1A8MUL3 147 aa18.12■□□□□ 0.49
SNX3-203ENST00000368979 C9JCJ5 164 aa18.12■□□□□ 0.49
SNX3-203ENST00000368979 M0R036 132 aa18.12■□□□□ 0.49
SNX3-203ENST00000368979 SCO1O75880 301 aa18.12■□□□□ 0.49
SNX3-203ENST00000368979 CMTM2Q8TAZ6 248 aa18.12■□□□□ 0.49
SNX3-203ENST00000368979 HELTA6NFD8 242 aa18.11■□□□□ 0.49
SNX3-203ENST00000368979 C2orf70A6NJV1 201 aa18.11■□□□□ 0.49
SNX3-203ENST00000368979 CNN1P51911 297 aaKnown RBP18.11■□□□□ 0.49
SNX3-203ENST00000368979 RPH3ALQ9UNE2 315 aa18.11■□□□□ 0.49
SNX3-203ENST00000368979 M0R3E3 92 aa18.1■□□□□ 0.49
SNX3-203ENST00000368979 RPL23P62829 140 aaKnown RBP18.1■□□□□ 0.49
SNX3-203ENST00000368979 ARL6IP6Q8N6S5 226 aa18.1■□□□□ 0.49
SNX3-203ENST00000368979 DLX4Q92988 240 aaPredicted RBP18.1■□□□□ 0.49
SNX3-203ENST00000368979 LINC00479Q96M42 142 aa18.1■□□□□ 0.49
SNX3-203ENST00000368979 CCL24O00175 119 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 CBLN1P23435 193 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 TAS2R60P59551 318 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 RHEBQ15382 184 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 IGF2BP2-AS1Q96M15 143 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 PEMTQ9UBM1 199 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 KLF12Q9Y4X4 402 aa18.09■□□□□ 0.49
SNX3-203ENST00000368979 TRAV8-2A0A0B4J237 113 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 FOXL1Q12952 345 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 TMEM183BQ1AE95 376 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 TCF24Q7RTU0 167 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 LINC01551Q86U37 167 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 OR9G4Q8NGQ1 327 aa18.08■□□□□ 0.49
SNX3-203ENST00000368979 C7orf77A4D0Y5 90 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 DIRC3C9JPN6 131 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 SOCS3O14543 225 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 HLA-DMBP28068 263 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 ADIRFQ15847 76 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 CENPWQ5EE01 88 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 IGFL4Q6B9Z1 124 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 ADAMTSL5Q6ZMM2 481 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 NRN1Q9NPD7 142 aa18.08■□□□□ 0.48
SNX3-203ENST00000368979 LY96Q9Y6Y9 160 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms