RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TRGV9Q99603 122 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 A0A0G2JRQ6 117 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 NXPH4O95158 308 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 STPG4Q8N801 248 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 TRAV25A0A0B4J276 109 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 HIST3H2BBQ8N257 126 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 HS3ST6Q96QI5 342 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 G3V318 75 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 SIPA1L1O43166 1804 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 VCYO14598 125 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 GAGE6Q13070 117 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 DAD1P61803 113 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 Q6P435 159 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 TNFRSF14Q92956 283 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 HOXD3P31249 432 aaPredicted RBP14.72□□□□□ -0.05
SNX27-202ENST00000368841 MINOS1Q5TGZ0 78 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 MINOS1-NBL1R4GNA1 71 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 CABIN1Q9Y6J0 2220 aa14.72□□□□□ -0.05
SNX27-202ENST00000368841 A0A1B0GUS0 222 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 FAM90A9PA6NNJ1 464 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 FAM223BA6NKX1 122 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 FAM223AQ8IWN6 122 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 ZNF561-AS1K7EIQ3 104 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 NDUFAF3Q9BU61 184 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 CFHR2P36980 270 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 ZFAND6Q6FIF0 208 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 GTSF1LQ9H1H1 148 aa14.71□□□□□ -0.05
SNX27-202ENST00000368841 PMVKQ15126 192 aa14.71□□□□□ -0.06
SNX27-202ENST00000368841 LINC01551Q86U37 167 aa14.71□□□□□ -0.06
SNX27-202ENST00000368841 PLEKHB2Q96CS7 222 aa14.71□□□□□ -0.06
SNX27-202ENST00000368841 SEC16AO15027 2179 aa14.71□□□□□ -0.06
SNX27-202ENST00000368841 RPP25LQ8N5L8 163 aaKnown RBP14.7□□□□□ -0.06
SNX27-202ENST00000368841 TCF15Q12870 199 aa14.7□□□□□ -0.06
SNX27-202ENST00000368841 AZU1P20160 251 aa14.7□□□□□ -0.06
SNX27-202ENST00000368841 SPOCK3Q9BQ16 436 aa14.7□□□□□ -0.06
SNX27-202ENST00000368841 CEACAM8P31997 349 aaPredicted RBP14.7□□□□□ -0.06
SNX27-202ENST00000368841 RNF166Q96A37 237 aaPredicted RBP14.7□□□□□ -0.06
SNX27-202ENST00000368841 TMEM242Q9NWH2 141 aa14.7□□□□□ -0.06
SNX27-202ENST00000368841 HAPLN4Q86UW8 402 aa14.7□□□□□ -0.06
SNX27-202ENST00000368841 RASL11AQ6T310 242 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 C9JAW5 83 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 M0R1W7 72 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 ARMS2P0C7Q2 107 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 UBE2CO00762 179 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 IGLV2-23P01705 113 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 KIR3DS1Q14943 382 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 TP53TG1Q9Y2A0 90 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 LINC01619G3V211 115 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 C9orf139Q6ZV77 190 aa14.69□□□□□ -0.06
SNX27-202ENST00000368841 LHBP01229 141 aa14.68□□□□□ -0.06
SNX27-202ENST00000368841 FAM120AOSQ5T036 256 aa14.68□□□□□ -0.06
SNX27-202ENST00000368841 MDS2Q8NDY4 140 aa14.68□□□□□ -0.06
SNX27-202ENST00000368841 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.68□□□□□ -0.06
SNX27-202ENST00000368841 MPV17L2Q567V2 206 aa14.68□□□□□ -0.06
SNX27-202ENST00000368841 GAGE2BQ13066 116 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 ATP6V0BQ99437 205 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 SNHG12Q9BXW3 62 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 KIF26BQ2KJY2 2108 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 C15orf62A8K5M9 175 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 C3orf79P0CE67 100 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 TMEM126AQ9H061 195 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 DAZ1Q9NQZ3 744 aaKnown RBP14.67□□□□□ -0.06
SNX27-202ENST00000368841 LIME1Q9H400 295 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 THAP8Q8NA92 274 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 TRAV12-1A0A0B4J245 112 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 RNF114Q9Y508 228 aa14.67□□□□□ -0.06
SNX27-202ENST00000368841 FREM3P0C091 2139 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 KLF12Q9Y4X4 402 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 USMG5Q96IX5 58 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 CMC4P56277 68 aaPredicted RBP14.66□□□□□ -0.06
SNX27-202ENST00000368841 MYMXA0A1B0GTQ4 84 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 DTX1Q86Y01 620 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 NKAPP1Q8N9T2 125 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 FGF16O43320 207 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 MSMBP08118 114 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 RNASE2P10153 161 aaKnown RBP14.66□□□□□ -0.06
SNX27-202ENST00000368841 Q86TA4 180 aa14.66□□□□□ -0.06
SNX27-202ENST00000368841 DEFB105AQ8NG35 78 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 TNFSF13O75888 250 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 GAS1P54826 345 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 TEX36Q5VZQ5 186 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 FANCMQ8IYD8 2048 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 GBF1Q92538 1859 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 A0A1W2PPI3 338 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 NDUFB8O95169 186 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 A0A0J9YY99 117 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 IGF2BP2-AS1Q96M15 143 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 CHAC1Q9BUX1 264 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 SYS1-DBNDD2H3BUS1 97 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 ZC2HC1BQ5TFG8 222 aa14.65□□□□□ -0.06
SNX27-202ENST00000368841 NMSQ5H8A3 153 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 IGKV1-39P01597 117 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 IGKV1D-39P04432 117 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 B3GALT5-AS1P59052 145 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 TCF20Q9UGU0 1960 aaKnown RBP14.64□□□□□ -0.07
SNX27-202ENST00000368841 CD5P06127 495 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 ZNRF2Q8NHG8 242 aa14.64□□□□□ -0.07
SNX27-202ENST00000368841 COLCA2A8K830 154 aa14.63□□□□□ -0.07
SNX27-202ENST00000368841 PTPRDP23468 1912 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms