RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZNF586Q9NXT0 402 aa10.34□□□□□ -0.75
TPM3-211ENST00000368531 SOCS3O14543 225 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 IGLC2P0DOY2 106 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 IGHV4-30-4P0DP06 118 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 PRB4P10163 310 aaPredicted RBP10.33□□□□□ -0.76
TPM3-211ENST00000368531 C4BPBP20851 252 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 HLA-DMBP28068 263 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 MEOX2P50222 304 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 TAS2R45P59539 299 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 SNRPD3P62318 126 aaKnown RBP10.33□□□□□ -0.76
TPM3-211ENST00000368531 KHDC3LQ587J8 217 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 RNF182Q8N6D2 247 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 TMED6Q8WW62 240 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 RAB24Q969Q5 203 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 PAXXQ9BUH6 204 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 ACTR3CQ9C0K3 210 aaPredicted RBP10.33□□□□□ -0.76
TPM3-211ENST00000368531 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
TPM3-211ENST00000368531 A0A087X0K7 114 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 KNCNA6PVL3 124 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 BOLA2-SMG1P6H3BVE0 249 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 SLC17A3O00476 420 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 SEC11BP0C7V7 166 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 HIST1H1EP10412 219 aaKnown RBP10.32□□□□□ -0.76
TPM3-211ENST00000368531 PSMB3P49720 205 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 DEFB1P60022 68 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 RNF141Q8WVD5 230 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 ZNF503Q96F45 646 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 C20orf173Q96LM9 149 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 CITED4Q96RK1 184 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 HRH4Q9H3N8 390 aa10.32□□□□□ -0.76
TPM3-211ENST00000368531 TRAV8-2A0A0B4J237 113 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 ISLRO14498 428 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
TPM3-211ENST00000368531 UBE2L3P68036 154 aaKnown RBP10.31□□□□□ -0.76
TPM3-211ENST00000368531 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 SSX7Q7RTT5 188 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 SLC51BQ86UW2 128 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 STOML3Q8TAV4 291 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 FXYD5Q96DB9 178 aa10.31□□□□□ -0.76
TPM3-211ENST00000368531 RBMY1BA6NDE4 496 aaKnown RBP10.3□□□□□ -0.76
TPM3-211ENST00000368531 RBMY1EA6NEQ0 496 aaKnown RBP10.3□□□□□ -0.76
TPM3-211ENST00000368531 NBEAP1P0C6P0 100 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 RBMY1DP0C7P1 496 aaKnown RBP10.3□□□□□ -0.76
TPM3-211ENST00000368531 FRMD6-AS1P0C7T7 363 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 FHITP49789 147 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 ZNF726P1Q15940 193 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 ACTL10Q5JWF8 245 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 IQCF2Q8IXL9 164 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 ZNF738Q8NE65 137 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 FAM110AQ9BQ89 295 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 ZNF331Q9NQX6 463 aaPredicted RBP10.3□□□□□ -0.76
TPM3-211ENST00000368531 AGRNO00468 2067 aa10.3□□□□□ -0.76
TPM3-211ENST00000368531 TRBV19A0A075B6N1 114 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 CTXND1A0A1B0GTU2 59 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 F6UB75 175 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 FGF8P55075 233 aaPredicted RBP10.29□□□□□ -0.76
TPM3-211ENST00000368531 GUK1Q16774 197 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 SAMD13Q5VXD3 122 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 PQLC2Q6ZP29 291 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 FAM213BQ8TBF2 198 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 SAT2Q96F10 170 aaPredicted RBP10.29□□□□□ -0.76
TPM3-211ENST00000368531 ASCL2Q99929 193 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 SLC50A1Q9BRV3 221 aa10.29□□□□□ -0.76
TPM3-211ENST00000368531 ZNF705FA8MVS1 300 aaPredicted RBP10.28□□□□□ -0.76
TPM3-211ENST00000368531 NDUFB4O95168 129 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 ZNF705DP0CH99 300 aaPredicted RBP10.28□□□□□ -0.76
TPM3-211ENST00000368531 ZNF705BP0CI00 300 aaPredicted RBP10.28□□□□□ -0.76
TPM3-211ENST00000368531 STAG3L2P0CL84 134 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 STAG3L3P0CL85 134 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 GCHFRP30047 84 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 RANP62826 216 aaKnown RBP10.28□□□□□ -0.76
TPM3-211ENST00000368531 PSG3Q16557 428 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 GDF5OSQ5U4N7 250 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 EIF5AL1Q6IS14 154 aaKnown RBP10.28□□□□□ -0.76
TPM3-211ENST00000368531 STHQ8IWL8 128 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 EXOC3-AS1Q8N2X6 119 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 PHYHIPLQ96FC7 376 aa10.28□□□□□ -0.76
TPM3-211ENST00000368531 NOTCH1P46531 2555 aa10.27□□□□□ -0.76
TPM3-211ENST00000368531 LOC102724200A0A096LPH7 203 aaPredicted RBP10.27□□□□□ -0.77
TPM3-211ENST00000368531 A0A1B0GV50 99 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 MAP1LC3B2A6NCE7 125 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 CXorf1O96002 111 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 ICAM4Q14773 271 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 FAM74A1Q5RGS3 127 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 MAP1LC3BQ9GZQ8 125 aa10.27□□□□□ -0.77
TPM3-211ENST00000368531 A8MZ25 164 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 PSG9Q00887 426 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 EBLN2Q6P2I7 272 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 ALKAL2Q6UX46 152 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 OR4B1Q8NGF8 309 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 SFT2D1Q8WV19 159 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 RPUSD4Q96CM3 377 aaKnown RBP10.26□□□□□ -0.77
TPM3-211ENST00000368531 TMPRSS5Q9H3S3 457 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 AAMDCQ9H7C9 122 aa10.26□□□□□ -0.77
TPM3-211ENST00000368531 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 M0R3E3 92 aa10.25□□□□□ -0.77
TPM3-211ENST00000368531 ZNF253O75346 499 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms