RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CCDC94Q9BW85 323 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 LYRM2Q9NU23 88 aaPredicted RBP0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 SSR3Q9UNL2 185 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 RNF11Q9Y3C5 154 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 ZGRF1Q86YA3 2104 aa0.58□□□□□ -2.32
ECHDC1-201ENST00000368287 RFX7Q2KHR2 1363 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 ZNF462Q96JM2 2506 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 TMEM238C9JI98 176 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 C17orf112F2Z3M2 114 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 AIPO00170 330 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 OR10J4P0C629 311 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 OGNP20774 298 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 RAB5CP51148 216 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 EIF3IQ13347 325 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 OR13C6PQ8NH95 151 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 HYLS1Q96M11 299 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 PBOV1Q9GZY1 135 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 CACYBPQ9HB71 228 aaKnown RBP0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 UFC1Q9Y3C8 167 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 FRMPD1Q5SYB0 1578 aa0.57□□□□□ -2.32
ECHDC1-201ENST00000368287 KDM6AO15550 1401 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 UHRF1BP1Q6BDS2 1440 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 CD109Q6YHK3 1445 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 C9orf170A2RU37 121 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 C5orf67F2Z3F1 127 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 H3BRM9 83 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 RER1O15258 196 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 G0S2P27469 103 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 GLRXP35754 106 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 PPP1R2P41236 205 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 KLRD1Q13241 179 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 LTC4SQ16873 150 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 SCGB2B2Q4G0G5 96 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 PPP1R2P3Q6NXS1 205 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 HAGHLQ6PII5 290 aaPredicted RBP0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 PPTC7Q8NI37 304 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 PBDC1Q9BVG4 233 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 TMEM138Q9NPI0 162 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 STOML2Q9UJZ1 356 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 TRPM1Q7Z4N2 1603 aa0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 EIF3AQ14152 1382 aaKnown RBP0.56□□□□□ -2.32
ECHDC1-201ENST00000368287 OR2T8A6NH00 312 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 C1orf140Q5VVS0 124 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 ARPINQ7Z6K5 226 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 TEN1Q86WV5 123 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 PLPP5Q8NEB5 264 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 WFDC10AQ9H1F0 79 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 GID8Q9NWU2 228 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 TNFSF18Q9UNG2 199 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 PTPRDP23468 1912 aa0.55□□□□□ -2.32
ECHDC1-201ENST00000368287 PPYP01298 95 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 IFNA14P01570 189 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 IDO1P14902 403 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 COX7CP15954 63 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 CRYBA4P53673 196 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 FKBP1CQ5VVH2 108 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 GLIPR1L1Q6UWM5 242 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 TMED4Q7Z7H5 227 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 OR5AS1Q8N127 324 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 TAF9BQ9HBM6 251 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 OR52A1Q9UKL2 312 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 ZDBF2Q9HCK1 2354 aa0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
ECHDC1-201ENST00000368287 SPTBP11277 2137 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 TRAV27A0A087WT01 109 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 hDV103S1A0JD37 113 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 APOA2P02652 100 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 GNG10P50151 68 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 HBBP68871 147 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 IFT20Q8IY31 132 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 LRRC18Q8N456 261 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 MALSU1Q96EH3 234 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 PRRT1Q99946 306 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 OTORQ9NRC9 128 aa0.53□□□□□ -2.32
ECHDC1-201ENST00000368287 JMJD7-PLA2G4BH0Y9G9 81 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 HIST1H2BKO60814 126 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 HIST1H2BJP06899 126 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 POU6F1Q14863 301 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 PHF5AQ7RTV0 110 aaKnown RBP0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 NUP35Q8NFH5 326 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 PSMF1Q92530 271 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 PLEKHB2Q96CS7 222 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 MAP1LC3BQ9GZQ8 125 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 ANKRD31Q8N7Z5 1873 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 MUC4Q99102 2169 aa0.52□□□□□ -2.33
ECHDC1-201ENST00000368287 TRAV23DV6A0A075B6W5 121 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 IGLV3-32A0A0A0MS00 114 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 TRAV5A0A0B4J249 113 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 CD14P08571 375 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 CAMSAP2Q08AD1 1489 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 MIR22HGQ0VDD5 57 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 RTL8BQ17RB0 113 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 NEK7Q8TDX7 302 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 LIMD2Q9BT23 127 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 RTL8AQ9BWD3 113 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 TANC2Q9HCD6 1990 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 NISCHQ9Y2I1 1504 aa0.51□□□□□ -2.33
ECHDC1-201ENST00000368287 NUP210Q8TEM1 1887 aaPredicted RBP0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 ADGBQ8N7X0 1667 aa0.5□□□□□ -2.33
ECHDC1-201ENST00000368287 NCAPD3P42695 1498 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms