RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 GAGE7O76087 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE12FP0CL80 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE12GP0CL81 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE12IP0CL82 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE4Q13068 117 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 MLANAQ16655 118 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 ZNF474Q6S9Z5 364 aaPredicted RBP12.74□□□□□ -0.37
FBXO28-201ENST00000366862 CRIPAKQ8N1N5 446 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 LY6G5BQ8NDX9 201 aa12.74□□□□□ -0.37
FBXO28-201ENST00000366862 TNS1Q9HBL0 1735 aaKnown RBP12.73□□□□□ -0.37
FBXO28-201ENST00000366862 SPRR3Q9UBC9 169 aa12.73□□□□□ -0.37
FBXO28-201ENST00000366862 UTF1Q5T230 341 aa12.73□□□□□ -0.37
FBXO28-201ENST00000366862 PLAURQ03405 335 aa12.73□□□□□ -0.37
FBXO28-201ENST00000366862 SIGLEC9Q9Y336 463 aa12.73□□□□□ -0.37
FBXO28-201ENST00000366862 PRB4P10163 310 aaPredicted RBP12.73□□□□□ -0.37
FBXO28-201ENST00000366862 C15orf32Q32M92 178 aa12.73□□□□□ -0.37
FBXO28-201ENST00000366862 H3BMG7 143 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 SLC25A16P16260 332 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 MRPL51Q4U2R6 128 aaKnown RBP12.72□□□□□ -0.37
FBXO28-201ENST00000366862 OOSP1A8MZH6 123 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE5Q13069 117 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 GAGE6Q13070 117 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 TCF15Q12870 199 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 RALGAPA1Q6GYQ0 2036 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 CD24P25063 80 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 SIGLEC8Q9NYZ4 499 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 GAFA1Q96PS6 74 aa12.72□□□□□ -0.37
FBXO28-201ENST00000366862 LMO1P25800 156 aa12.71□□□□□ -0.37
FBXO28-201ENST00000366862 C17orf82Q86X59 251 aaPredicted RBP12.71□□□□□ -0.37
FBXO28-201ENST00000366862 VWC2Q2TAL6 325 aa12.71□□□□□ -0.37
FBXO28-201ENST00000366862 PAX4O43316 350 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 WNT2P09544 360 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 ATP5J2P56134 94 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 CFHR1Q03591 330 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 COLCA1Q6ZS62 124 aa12.71□□□□□ -0.38
FBXO28-201ENST00000366862 TRBV7-1A0A0A6YYK4 115 aa12.7□□□□□ -0.38
FBXO28-201ENST00000366862 PRO1854Q9UHT4 67 aa12.7□□□□□ -0.38
FBXO28-201ENST00000366862 PMVKQ15126 192 aa12.7□□□□□ -0.38
FBXO28-201ENST00000366862 RNASE8Q8TDE3 154 aaKnown RBP12.7□□□□□ -0.38
FBXO28-201ENST00000366862 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
FBXO28-201ENST00000366862 ETV2O00321 342 aaPredicted RBP12.7□□□□□ -0.38
FBXO28-201ENST00000366862 FCN3O75636 299 aa12.7□□□□□ -0.38
FBXO28-201ENST00000366862 PRB3Q04118 309 aaPredicted RBP12.7□□□□□ -0.38
FBXO28-201ENST00000366862 WIPF3A6NGB9 483 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
FBXO28-201ENST00000366862 C12orf74Q32Q52 190 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 VWC2LB2RUY7 222 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 K7EN84 100 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 HLA-DRB4P13762 266 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 CSRP1P21291 193 aaKnown RBP12.69□□□□□ -0.38
FBXO28-201ENST00000366862 NDUFA4L2Q9NRX3 87 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 HLA-DRB4X5D2U9 266 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 TRBV19A0A075B6N1 114 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 ARTNQ5T4W7 220 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 SPXQ9BT56 116 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 TRAV41A0A0B4J266 112 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 TRACP01848 142 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 B3GALT5-AS1P59052 145 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 ZFP36L1Q07352 338 aaKnown RBP12.69□□□□□ -0.38
FBXO28-201ENST00000366862 C5orf64Q2M2E5 130 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 RNASE6Q93091 150 aaKnown RBP12.69□□□□□ -0.38
FBXO28-201ENST00000366862 TMEM14CQ9P0S9 112 aa12.69□□□□□ -0.38
FBXO28-201ENST00000366862 LAMTOR3Q9UHA4 124 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 TMEM178BH3BS89 294 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 IGKV1-16P04430 117 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 FGF6P10767 208 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 STHQ8IWL8 128 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 HLA-DMBP28068 263 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 MINOS1Q5TGZ0 78 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 Q6ZVH6 145 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 ZNF747Q9BV97 191 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 TP53TG1Q9Y2A0 90 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 MINOS1-NBL1R4GNA1 71 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 PRR19A6NJB7 356 aa12.68□□□□□ -0.38
FBXO28-201ENST00000366862 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 F8VRH5 84 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 K7ERJ3 54 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 SOCS3O14543 225 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 C8orf49Q96NF6 230 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 TPRP12270 2363 aaKnown RBP12.67□□□□□ -0.38
FBXO28-201ENST00000366862 LRRK1Q38SD2 2015 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 TRPT1Q86TN4 253 aaKnown RBP12.67□□□□□ -0.38
FBXO28-201ENST00000366862 JPT2Q9H910 190 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 BUB1B-PAK6H3BSN5 160 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 PRADC1Q9BSG0 188 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 MRPL35Q9NZE8 188 aaKnown RBP12.67□□□□□ -0.38
FBXO28-201ENST00000366862 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 CCL19Q99731 98 aa12.67□□□□□ -0.38
FBXO28-201ENST00000366862 SNRNP200O75643 2136 aaKnown RBP12.66□□□□□ -0.38
FBXO28-201ENST00000366862 SRD5A1P18405 259 aa12.66□□□□□ -0.38
FBXO28-201ENST00000366862 RPL36AP83881 106 aaKnown RBP12.66□□□□□ -0.38
FBXO28-201ENST00000366862 RPL36ALQ969Q0 106 aaKnown RBP12.66□□□□□ -0.38
FBXO28-201ENST00000366862 NDUFS7O75251 213 aa12.66□□□□□ -0.38
FBXO28-201ENST00000366862 PTPRDP23468 1912 aa12.66□□□□□ -0.38
FBXO28-201ENST00000366862 PRIMA1Q86XR5 153 aa12.66□□□□□ -0.38
FBXO28-201ENST00000366862 CHCHD5Q9BSY4 110 aa12.66□□□□□ -0.38
FBXO28-201ENST00000366862 SBF1O95248 1867 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms