RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 INSP01308 110 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 FAM110DQ8TAY7 271 aaPredicted RBP14.98□□□□□ -0.01
CLIP2-202ENST00000361545 DEFB130BP0DP73 79 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 DEFB130AP0DP74 79 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 ZNF876PQ49A33 203 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 ORMDL2Q53FV1 153 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 C1QTNF4Q9BXJ3 329 aa14.98□□□□□ -0.01
CLIP2-202ENST00000361545 A0A0U1RRA0 63 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 SH2D1AO60880 128 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 SMIM13P0DJ93 91 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 NDUFAF3Q9BU61 184 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 A0A1B0GV72 72 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 CUL9Q8IWT3 2517 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 ERCC8Q13216 396 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 ACACBO00763 2458 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 MMP23AO75900 390 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 TEX36Q5VZQ5 186 aa14.97□□□□□ -0.01
CLIP2-202ENST00000361545 PSG3Q16557 428 aa14.96□□□□□ -0.01
CLIP2-202ENST00000361545 TMEM170AQ8WVE7 144 aa14.96□□□□□ -0.01
CLIP2-202ENST00000361545 IGHV3-64A0A075B6Q5 118 aa14.96□□□□□ -0.01
CLIP2-202ENST00000361545 SRSF8Q9BRL6 282 aaKnown RBP14.96□□□□□ -0.01
CLIP2-202ENST00000361545 TTC32Q5I0X7 151 aa14.96□□□□□ -0.01
CLIP2-202ENST00000361545 LINC01619G3V211 115 aa14.96□□□□□ -0.02
CLIP2-202ENST00000361545 TECTAO75443 2155 aa14.96□□□□□ -0.02
CLIP2-202ENST00000361545 RPL36AP83881 106 aaKnown RBP14.95□□□□□ -0.02
CLIP2-202ENST00000361545 NIT1Q86X76 327 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 RPL36ALQ969Q0 106 aaKnown RBP14.95□□□□□ -0.02
CLIP2-202ENST00000361545 PLXNA2O75051 1894 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 ZNF833PQ6ZTB9 187 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 PRDM13Q9H4Q3 707 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 SHANK1Q9Y566 2161 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 MALRD1Q5VYJ5 2156 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 SHISA9B4DS77 424 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 SRSF4Q08170 494 aaKnown RBP14.95□□□□□ -0.02
CLIP2-202ENST00000361545 DIAPH2-AS1Q14236 149 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 RNF182Q8N6D2 247 aa14.95□□□□□ -0.02
CLIP2-202ENST00000361545 C1orf147Q96MC9 270 aaPredicted RBP14.95□□□□□ -0.02
CLIP2-202ENST00000361545 C11orf68Q9H3H3 251 aaKnown RBP14.95□□□□□ -0.02
CLIP2-202ENST00000361545 FOXL1Q12952 345 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 MTURNQ8N3F0 131 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 C14orf178Q8N769 122 aaPredicted RBP14.94□□□□□ -0.02
CLIP2-202ENST00000361545 XCL2Q9UBD3 114 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 SHANK2-AS3Q9BTD1 123 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 GNB1LQ9BYB4 327 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 TRAV1-1A0A0B4J248 108 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 D6R8Y8 96 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 J3QLI3 93 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 LINC01551Q86U37 167 aa14.94□□□□□ -0.02
CLIP2-202ENST00000361545 HOXA3O43365 443 aaPredicted RBP14.93□□□□□ -0.02
CLIP2-202ENST00000361545 TPSG1Q9NRR2 321 aa14.93□□□□□ -0.02
CLIP2-202ENST00000361545 NDUFA4L2Q9NRX3 87 aa14.93□□□□□ -0.02
CLIP2-202ENST00000361545 TMEM14BQ9NUH8 114 aa14.93□□□□□ -0.02
CLIP2-202ENST00000361545 CHTOPQ9Y3Y2 248 aaKnown RBP14.92□□□□□ -0.02
CLIP2-202ENST00000361545 A0A087WWL8 130 aa14.92□□□□□ -0.02
CLIP2-202ENST00000361545 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.92□□□□□ -0.02
CLIP2-202ENST00000361545 UBE2CO00762 179 aa14.92□□□□□ -0.02
CLIP2-202ENST00000361545 FAM120AOSQ5T036 256 aa14.92□□□□□ -0.02
CLIP2-202ENST00000361545 IGFL2Q6UWQ7 119 aa14.92□□□□□ -0.02
CLIP2-202ENST00000361545 ATP5L2Q7Z4Y8 100 aa14.92□□□□□ -0.02
CLIP2-202ENST00000361545 ZNF134P52741 427 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 LINC00479Q96M42 142 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 PLXND1Q9Y4D7 1925 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 SPG11Q96JI7 2443 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 DPM2O94777 84 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 LYPD1Q8N2G4 141 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 CD300EQ496F6 205 aaPredicted RBP14.91□□□□□ -0.02
CLIP2-202ENST00000361545 C22orf46C9J442 243 aa14.91□□□□□ -0.02
CLIP2-202ENST00000361545 RBMY1BA6NDE4 496 aaKnown RBP14.9□□□□□ -0.02
CLIP2-202ENST00000361545 RBMY1EA6NEQ0 496 aaKnown RBP14.9□□□□□ -0.02
CLIP2-202ENST00000361545 RBMY1DP0C7P1 496 aaKnown RBP14.9□□□□□ -0.02
CLIP2-202ENST00000361545 RBMY1A1P0DJD3 496 aaKnown RBP14.9□□□□□ -0.02
CLIP2-202ENST00000361545 RBMY1CP0DJD4 496 aa14.9□□□□□ -0.02
CLIP2-202ENST00000361545 DMRTC2Q8IXT2 367 aaPredicted RBP14.9□□□□□ -0.02
CLIP2-202ENST00000361545 LAGE3Q14657 143 aa14.9□□□□□ -0.02
CLIP2-202ENST00000361545 DPH3P1Q9H4G8 78 aa14.9□□□□□ -0.02
CLIP2-202ENST00000361545 C15orf65H3BRN8 121 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 SPINK13Q1W4C9 94 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 IGF2-ASQ6U949 168 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 SFTA2Q6UW10 78 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 IFI27L1Q96BM0 104 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 NCOR1P1Q9H4R4 102 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 DKK1O94907 266 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 PHLDA1Q8WV24 401 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-202ENST00000361545 A0A1W2PNU3 283 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-202ENST00000361545 LAMTOR2Q9Y2Q5 125 aa14.89□□□□□ -0.03
CLIP2-202ENST00000361545 NUP210Q8TEM1 1887 aaPredicted RBP14.89□□□□□ -0.03
CLIP2-202ENST00000361545 KNCNA6PVL3 124 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BKO60814 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BJP06899 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BOP23527 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BBP33778 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BDP58876 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BCP62807 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST2H2BEQ16778 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BHQ93079 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BNQ99877 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 HIST1H2BMQ99879 126 aa14.88□□□□□ -0.03
CLIP2-202ENST00000361545 LSM4Q9Y4Z0 139 aaKnown RBP14.88□□□□□ -0.03
CLIP2-202ENST00000361545 TRAV2A0A0B4J234 112 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms