RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RFNGQ9Y644 331 aa10.29□□□□□ -0.76
NSMCE1-201ENST00000361439 IGHV4-30-4P0DP06 118 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 SPATA31B1PQ5VZV4 182 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 LRRC20Q8TCA0 184 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 PAXXQ9BUH6 204 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 TUBA4BQ9H853 241 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 RPRMQ9NS64 109 aa10.28□□□□□ -0.76
NSMCE1-201ENST00000361439 TRBV19A0A075B6N1 114 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 OR7C2O60412 319 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 STAG3L2P0CL84 134 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 STAG3L3P0CL85 134 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 RAB5CP51148 216 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 DEFB131AP59861 70 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 PSG9Q00887 426 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 FAM122CQ6P4D5 195 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 FAM24BQ8N5W8 94 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 DEFB125Q8N687 156 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 RAB24Q969Q5 203 aa10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 SAT2Q96F10 170 aaPredicted RBP10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF331Q9NQX6 463 aaPredicted RBP10.27□□□□□ -0.77
NSMCE1-201ENST00000361439 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 H3BQ15 152 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 NBEAP1P0C6P0 100 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF688P0C7X2 276 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 PSMG4Q5JS54 123 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 LYPD1Q8N2G4 141 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 FXYD5Q96DB9 178 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 PHYHIPLQ96FC7 376 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF586Q9NXT0 402 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 UBQLN2Q9UHD9 624 aa10.26□□□□□ -0.77
NSMCE1-201ENST00000361439 TRAV8-2A0A0B4J237 113 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 CXorf1O96002 111 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 PYYP10082 97 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 FOXI2Q6ZQN5 318 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 MRPL53Q96EL3 112 aaKnown RBP10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF503Q96F45 646 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 SRD5A3Q9H8P0 318 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 PRELID1Q9Y255 219 aa10.25□□□□□ -0.77
NSMCE1-201ENST00000361439 UBE2L3P68036 154 aaKnown RBP10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 PSG3Q16557 428 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 LINC00322Q6ZN03 302 aaPredicted RBP10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 APRG1Q8IVJ8 170 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 SUN5Q8TC36 379 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 TMED6Q8WW62 240 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 LINC00052Q96N35 136 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 CLUHP3Q96NS8 147 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 CITED4Q96RK1 184 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 TMEM167BQ9NRX6 74 aa10.24□□□□□ -0.77
NSMCE1-201ENST00000361439 LOC102724200A0A096LPH7 203 aaPredicted RBP10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 KIR2DL5BA0A0G2JN68 375 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 KIR2DL5BA0A0G2JPC4 375 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 OR10J4P0C629 311 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 FRMD6-AS1P0C7T7 363 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 NKX2-5P52952 324 aaPredicted RBP10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 EBLN2Q6P2I7 272 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 STHQ8IWL8 128 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 KIR2DL5AQ8N109 375 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 ARL6IP6Q8N6S5 226 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 KIR2DL5BQ8NHK3 375 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 B9D2Q9BPU9 175 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 SAV1Q9H4B6 383 aaPredicted RBP10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
NSMCE1-201ENST00000361439 SLC17A3O00476 420 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 NDUFB4O95168 129 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 ARL14EPLP0DKL9 152 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 HLA-DRB4P13762 266 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 APOC4P55056 127 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 BLNKQ8WV28 456 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 MBD3L1Q8WWY6 194 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 C20orf173Q96LM9 149 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 HLA-DRB4X5D2U9 266 aa10.22□□□□□ -0.77
NSMCE1-201ENST00000361439 A0A0J9YX75 114 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 RBMY1BA6NDE4 496 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 RBMY1EA6NEQ0 496 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 H3BMM0 161 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 UBE2CO00762 179 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 DUSP14O95147 198 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 RBMY1DP0C7P1 496 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 GCHFRP30047 84 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 SULT1A2P50226 295 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 NUTF2P61970 127 aaKnown RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF726P1Q15940 193 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 ZNF738Q8NE65 137 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.77
NSMCE1-201ENST00000361439 MAP1LC3B2A6NCE7 125 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 H3BTX0 84 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 HMGB3O15347 200 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 SNRPCP09234 159 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 NHLRC4P0CG21 123 aaPredicted RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 ACTL10Q5JWF8 245 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 SSX7Q7RTT5 188 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 TRPT1Q86TN4 253 aaKnown RBP10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 RNF182Q8N6D2 247 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 FAM213BQ8TBF2 198 aa10.2□□□□□ -0.78
NSMCE1-201ENST00000361439 RXFP4Q8TDU9 374 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms