RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 GPR82Q96P67 336 aa13.3□□□□□ -0.28
CLK2-202ENST00000361168 MRPL32Q9BYC8 188 aaKnown RBP13.3□□□□□ -0.28
CLK2-202ENST00000361168 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 ATF4P18848 351 aaPredicted RBP13.29□□□□□ -0.28
CLK2-202ENST00000361168 DEFB131AP59861 70 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 FAM74A1Q5RGS3 127 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 S100A7AQ86SG5 101 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 BLNKQ8WV28 456 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 FXYD5Q96DB9 178 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 OR51M1Q9H341 326 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 HRH4Q9H3N8 390 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 AGRNO00468 2067 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 PSMG4Q5JS54 123 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 AKR1C8PQ5T2L2 129 aa13.29□□□□□ -0.28
CLK2-202ENST00000361168 SAT2Q96F10 170 aaPredicted RBP13.29□□□□□ -0.28
CLK2-202ENST00000361168 NDUFB4O95168 129 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 ARL14EPLP0DKL9 152 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 S100A7P31151 101 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 FGF8P55075 233 aaPredicted RBP13.28□□□□□ -0.28
CLK2-202ENST00000361168 C16orf92Q96LL3 132 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 LINC00052Q96N35 136 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 PAXXQ9BUH6 204 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 TMEM14CQ9P0S9 112 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 TGP01266 2768 aa13.28□□□□□ -0.28
CLK2-202ENST00000361168 A0A087X0K7 114 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 MBP02144 154 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 IGHV4-30-4P0DP06 118 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 GDF5OSQ5U4N7 250 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 ALKAL2Q6UX46 152 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 RNF141Q8WVD5 230 aa13.27□□□□□ -0.28
CLK2-202ENST00000361168 F6UB75 175 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 STAG3L2P0CL84 134 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 STAG3L3P0CL85 134 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 DEFB121Q5J5C9 76 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 LCN15Q6UWW0 184 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 TMPRSS5Q9H3S3 457 aa13.27□□□□□ -0.29
CLK2-202ENST00000361168 TRBV19A0A075B6N1 114 aa13.26□□□□□ -0.29
CLK2-202ENST00000361168 TRAV2A0A0B4J234 112 aa13.26□□□□□ -0.29
CLK2-202ENST00000361168 EIF5AP63241 154 aaKnown RBP13.26□□□□□ -0.29
CLK2-202ENST00000361168 PHYHIPLQ96FC7 376 aa13.26□□□□□ -0.29
CLK2-202ENST00000361168 ACTR3CQ9C0K3 210 aaPredicted RBP13.26□□□□□ -0.29
CLK2-202ENST00000361168 ZNF331Q9NQX6 463 aaPredicted RBP13.26□□□□□ -0.29
CLK2-202ENST00000361168 ZMAT5Q9UDW3 170 aaKnown RBP13.26□□□□□ -0.29
CLK2-202ENST00000361168 A0A1B0GV50 99 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 KNCNA6PVL3 124 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 ZNF705FA8MVS1 300 aaPredicted RBP13.25□□□□□ -0.29
CLK2-202ENST00000361168 NBEAP1P0C6P0 100 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 HIST1H1EP10412 219 aaKnown RBP13.25□□□□□ -0.29
CLK2-202ENST00000361168 UBE2L3P68036 154 aaKnown RBP13.25□□□□□ -0.29
CLK2-202ENST00000361168 KHDC3LQ587J8 217 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 FAM213BQ8TBF2 198 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 DNAH9Q9NYC9 4486 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 TENM3Q9P273 2699 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 ISLRO14498 428 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 ZNF705DP0CH99 300 aaPredicted RBP13.25□□□□□ -0.29
CLK2-202ENST00000361168 ZNF705BP0CI00 300 aaPredicted RBP13.25□□□□□ -0.29
CLK2-202ENST00000361168 LRRC20Q8TCA0 184 aa13.25□□□□□ -0.29
CLK2-202ENST00000361168 M0R3E3 92 aa13.24□□□□□ -0.29
CLK2-202ENST00000361168 TAS2R45P59539 299 aa13.24□□□□□ -0.29
CLK2-202ENST00000361168 MRAPQ8TCY5 172 aa13.24□□□□□ -0.29
CLK2-202ENST00000361168 SRD5A3Q9H8P0 318 aa13.24□□□□□ -0.29
CLK2-202ENST00000361168 CTXND1A0A1B0GTU2 59 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 MEOX2P50222 304 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
CLK2-202ENST00000361168 RANP62826 216 aaKnown RBP13.23□□□□□ -0.29
CLK2-202ENST00000361168 RNF24Q9Y225 148 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 RBMY1BA6NDE4 496 aaKnown RBP13.23□□□□□ -0.29
CLK2-202ENST00000361168 RBMY1EA6NEQ0 496 aaKnown RBP13.23□□□□□ -0.29
CLK2-202ENST00000361168 PRAC2D3DTV9 90 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 RBMY1DP0C7P1 496 aaKnown RBP13.23□□□□□ -0.29
CLK2-202ENST00000361168 C4BPBP20851 252 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 PSMB3P49720 205 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 ACTL10Q5JWF8 245 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 IQCF2Q8IXL9 164 aa13.23□□□□□ -0.29
CLK2-202ENST00000361168 UMAD1C9J7I0 102 aa13.22□□□□□ -0.29
CLK2-202ENST00000361168 GCHFRP30047 84 aa13.22□□□□□ -0.29
CLK2-202ENST00000361168 PQLC2Q6ZP29 291 aa13.22□□□□□ -0.29
CLK2-202ENST00000361168 MAP1LC3B2A6NCE7 125 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 FRMD6-AS1P0C7T7 363 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 SULT1A2P50226 295 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 SFT2D1Q8WV19 159 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 MAP1LC3BQ9GZQ8 125 aa13.21□□□□□ -0.29
CLK2-202ENST00000361168 ID1P41134 155 aa13.21□□□□□ -0.3
CLK2-202ENST00000361168 CXorf1O96002 111 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 IGKV3-20P01619 116 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 RPL35AP18077 110 aaKnown RBP13.2□□□□□ -0.3
CLK2-202ENST00000361168 CCL20P78556 96 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 ICAM4Q14773 271 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 PSG3Q16557 428 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 GUK1Q16774 197 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 TUBA4BQ9H853 241 aa13.2□□□□□ -0.3
CLK2-202ENST00000361168 HUWE1Q7Z6Z7 4374 aaKnown RBP13.2□□□□□ -0.3
CLK2-202ENST00000361168 EIF5AL1Q6IS14 154 aaKnown RBP13.19□□□□□ -0.3
CLK2-202ENST00000361168 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
CLK2-202ENST00000361168 PDE6HQ13956 83 aa13.19□□□□□ -0.3
CLK2-202ENST00000361168 PCNPQ8WW12 178 aaKnown RBP13.19□□□□□ -0.3
CLK2-202ENST00000361168 SLC50A1Q9BRV3 221 aa13.19□□□□□ -0.3
CLK2-202ENST00000361168 Q9H3A6 140 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms