RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 PRSS46E5RG02 174 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 NDPQ00604 133 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 TRAV41A0A0B4J266 112 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 F8WEM9 126 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 CDK2AP2O75956 126 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 TAL2Q16559 108 aa10.9□□□□□ -0.66
CCDC144A-203ENST00000360495 IGHV1-3A0A0C4DH29 117 aa10.9□□□□□ -0.67
CCDC144A-203ENST00000360495 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.67
CCDC144A-203ENST00000360495 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.67
CCDC144A-203ENST00000360495 CARD19Q96LW7 228 aa10.9□□□□□ -0.67
CCDC144A-203ENST00000360495 LYNX1G3V0Z9 82 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 LYNX1P0DP58 116 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 Q6P435 159 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 SMIM27A0A1W2PRY6 76 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 UBR3Q6ZT12 1888 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 FREM3P0C091 2139 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 HAMPP81172 84 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 TMEM200BQ69YZ2 307 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 BOD1L2Q8IYS8 172 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 TMEM75Q8N9X5 138 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 ZNF236Q9UL36 1845 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 KIR2DL5BA0A0G2JN68 375 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 KIR2DL5BA0A0G2JPC4 375 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 IL18BPO95998 194 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 KIR2DL5AQ8N109 375 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 ZNF114Q8NC26 417 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 TMEM141Q96I45 108 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 IGHV1-8P0DP01 117 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 ANXA2RQ3ZCQ2 193 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 DTX2Q86UW9 622 aa10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 KLF2Q9Y5W3 355 aaPredicted RBP10.89□□□□□ -0.67
CCDC144A-203ENST00000360495 SIVA1O15304 175 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 FAM168AQ92567 244 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 SPANXCQ9NY87 97 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 ATAD5Q96QE3 1844 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 SP9P0CG40 484 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 MRPL51Q4U2R6 128 aaKnown RBP10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 NTN5Q8WTR8 489 aaPredicted RBP10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 SHANK2-AS3Q9BTD1 123 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 C3orf36Q3SXR2 165 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 MRPL35Q9NZE8 188 aaKnown RBP10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 COL24A1Q17RW2 1714 aa10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 TP53BP1Q12888 1972 aaPredicted RBP10.88□□□□□ -0.67
CCDC144A-203ENST00000360495 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 C20orf204Q6ZNR8 217 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 IGHV2-70DA0A0C4DH43 119 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 PAX9P55771 341 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 DIDO1Q9BTC0 2240 aaKnown RBP10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 CRYBA4P53673 196 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 PDE6HQ13956 83 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 FAM231DQ6ZW35 169 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 SPACA3Q8IXA5 215 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 RNF5Q99942 180 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 SIGLEC8Q9NYZ4 499 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 CEP250Q9BV73 2442 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 RBM3P98179 157 aaKnown RBP10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 PRSS22Q9GZN4 317 aa10.87□□□□□ -0.67
CCDC144A-203ENST00000360495 CFPP27918 469 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 TMEM258P61165 79 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 DEFB125Q8N687 156 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 WNT2P09544 360 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 MTCL1Q9Y4B5 1905 aaKnown RBP10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 HLA-DMBP28068 263 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 RNASE8Q8TDE3 154 aaKnown RBP10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 SIGLEC9Q9Y336 463 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 PINLYPA6NC86 204 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 LRRK1Q38SD2 2015 aa10.86□□□□□ -0.67
CCDC144A-203ENST00000360495 DOCK9Q9BZ29 2069 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 WIPF3A6NGB9 483 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 HLA-DRB4P13762 266 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 SUMO4Q6EEV6 95 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 IL17RELQ6ZVW7 336 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 HLA-DRB4X5D2U9 266 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 GGNQ86UU5 652 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 RGPD3A6NKT7 1758 aaPredicted RBP10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 RGPD4Q7Z3J3 1758 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 SAP30O75446 220 aa10.85□□□□□ -0.67
CCDC144A-203ENST00000360495 TRBV7-1A0A0A6YYK4 115 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 RPL32P62910 135 aaKnown RBP10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 TRAV12-1A0A0B4J245 112 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 IGKV1-6A0A0C4DH72 117 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 IGHG4P01861 327 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 SYNJ2BPP57105 145 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 UNQ6494/PRO21346Q6UXR6 183 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 IGKV1-16P04430 117 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 DTX1Q86Y01 620 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 SPRR3Q9UBC9 169 aa10.84□□□□□ -0.67
CCDC144A-203ENST00000360495 F8VRH5 84 aa10.83□□□□□ -0.67
CCDC144A-203ENST00000360495 RS1O15537 224 aa10.83□□□□□ -0.67
CCDC144A-203ENST00000360495 PSME4Q14997 1843 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 SH2D6Q7Z4S9 175 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms