RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
CCNE1-202ENST00000357943 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
CCNE1-202ENST00000357943 KPRPQ5T749 579 aaPredicted RBP11.12□□□□□ -0.63
CCNE1-202ENST00000357943 COMMD7Q86VX2 200 aa11.12□□□□□ -0.63
CCNE1-202ENST00000357943 FAM24BQ8N5W8 94 aa11.12□□□□□ -0.63
CCNE1-202ENST00000357943 PRR25Q96S07 402 aa11.12□□□□□ -0.63
CCNE1-202ENST00000357943 ACTR3CQ9C0K3 210 aaPredicted RBP11.12□□□□□ -0.63
CCNE1-202ENST00000357943 TMA7Q9Y2S6 64 aaKnown RBP11.12□□□□□ -0.63
CCNE1-202ENST00000357943 SORL1Q92673 2214 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 OR4C46A6NHA9 309 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 H3BQ15 152 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 H3BTX0 84 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 K7EQG2 157 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 OR7C2O60412 319 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 CD7P09564 240 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
CCNE1-202ENST00000357943 TAS2R45P59539 299 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 KHDC3LQ587J8 217 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 OR51M1Q9H341 326 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 HRH4Q9H3N8 390 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 TMEM14CQ9P0S9 112 aa11.11□□□□□ -0.63
CCNE1-202ENST00000357943 A0A087X0K7 114 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 SOCS3O14543 225 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 PRB2P02812 416 aaPredicted RBP11.1□□□□□ -0.63
CCNE1-202ENST00000357943 OR10J4P0C629 311 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 DPPA3Q6W0C5 159 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 LYPD6BQ8NI32 183 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 PAXXQ9BUH6 204 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 ZNF586Q9NXT0 402 aa11.1□□□□□ -0.63
CCNE1-202ENST00000357943 ZMAT5Q9UDW3 170 aaKnown RBP11.1□□□□□ -0.63
CCNE1-202ENST00000357943 TRAV2A0A0B4J234 112 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 CTXND1A0A1B0GTU2 59 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 FAM213BQ8TBF2 198 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 TEX46H3BTG2 121 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 SLC17A3O00476 420 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 ARL14EPLP0DKL9 152 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 HIST1H1EP10412 219 aaKnown RBP11.09□□□□□ -0.63
CCNE1-202ENST00000357943 CD81P60033 236 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 IGFL4Q6B9Z1 124 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 LCN15Q6UWW0 184 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 PQLC2Q6ZP29 291 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 BLNKQ8WV28 456 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 C16orf92Q96LL3 132 aa11.09□□□□□ -0.63
CCNE1-202ENST00000357943 MEOX2P50222 304 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 FGF8P55075 233 aaPredicted RBP11.08□□□□□ -0.64
CCNE1-202ENST00000357943 UBE2L3P68036 154 aaKnown RBP11.08□□□□□ -0.64
CCNE1-202ENST00000357943 ODF3L2Q3SX64 289 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 GTSCR1Q86UQ5 136 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 Q8N1Y9 231 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 EIF4E3Q8N5X7 224 aaKnown RBP11.08□□□□□ -0.64
CCNE1-202ENST00000357943 WFDC10AQ9H1F0 79 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 C19orf73Q9NVV2 129 aa11.08□□□□□ -0.64
CCNE1-202ENST00000357943 TRBV19A0A075B6N1 114 aa11.07□□□□□ -0.64
CCNE1-202ENST00000357943 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
CCNE1-202ENST00000357943 NBEAP1P0C6P0 100 aa11.07□□□□□ -0.64
CCNE1-202ENST00000357943 SMUG1Q53HV7 270 aa11.07□□□□□ -0.64
CCNE1-202ENST00000357943 MAP6D1Q9H9H5 199 aa11.07□□□□□ -0.64
CCNE1-202ENST00000357943 AURKAIP1Q9NWT8 199 aaPredicted RBP11.07□□□□□ -0.64
CCNE1-202ENST00000357943 MAP1LC3B2A6NCE7 125 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 ISLRO14498 428 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 NDUFB4O95168 129 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 CXorf1O96002 111 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 HLA-DMBP28068 263 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 GUK1Q16774 197 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 RNF182Q8N6D2 247 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 ZNF331Q9NQX6 463 aaPredicted RBP11.06□□□□□ -0.64
CCNE1-202ENST00000357943 A0A1B0GV50 99 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 RAB19A4D1S5 217 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 GCHFRP30047 84 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 PSMB3P49720 205 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 DEFB131AP59861 70 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
CCNE1-202ENST00000357943 ZNF124Q15973 351 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 APRG1Q8IVJ8 170 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 IQCF2Q8IXL9 164 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 SFT2D1Q8WV19 159 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 MBD3L1Q8WWY6 194 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 LINC00052Q96N35 136 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 TMPRSS5Q9H3S3 457 aa11.06□□□□□ -0.64
CCNE1-202ENST00000357943 OR11H12B2RN74 326 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
CCNE1-202ENST00000357943 ID1P41134 155 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 PDE6HQ13956 83 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 SAMD13Q5VXD3 122 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 DEFB125Q8N687 156 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
CCNE1-202ENST00000357943 TRAV1-1A0A0B4J248 108 aa11.04□□□□□ -0.64
CCNE1-202ENST00000357943 ZNF253O75346 499 aa11.04□□□□□ -0.64
CCNE1-202ENST00000357943 DEFB1P60022 68 aa11.04□□□□□ -0.64
CCNE1-202ENST00000357943 RANP62826 216 aaKnown RBP11.04□□□□□ -0.64
CCNE1-202ENST00000357943 EXOC3-AS1Q8N2X6 119 aa11.04□□□□□ -0.64
CCNE1-202ENST00000357943 FAM110AQ9BQ89 295 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms