RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ZNF292O60281 2723 aa13.97□□□□□ -0.17
RTN4-204ENST00000357732 MUC21A0A0G2JKD1 596 aa13.96□□□□□ -0.17
RTN4-204ENST00000357732 MUC21A0A140T8X8 626 aa13.96□□□□□ -0.17
RTN4-204ENST00000357732 ARF6P62330 175 aa13.96□□□□□ -0.17
RTN4-204ENST00000357732 MUC21Q5SSG8 566 aa13.96□□□□□ -0.17
RTN4-204ENST00000357732 CNIH1O95406 144 aa13.96□□□□□ -0.18
RTN4-204ENST00000357732 CSN3P07498 182 aa13.96□□□□□ -0.18
RTN4-204ENST00000357732 PRB3Q04118 309 aaPredicted RBP13.96□□□□□ -0.18
RTN4-204ENST00000357732 PRR31Q5SQ13 230 aa13.96□□□□□ -0.18
RTN4-204ENST00000357732 PPIAL4CA0A0B4J2A2 164 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 PPIAL4GP0DN37 164 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 CRIP1P50238 77 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 PSG9Q00887 426 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 LGALS9BQ3B8N2 356 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 LGALS9CQ6DKI2 356 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 NPFFR1Q9GZQ6 430 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 PEF1Q9UBV8 284 aaKnown RBP13.95□□□□□ -0.18
RTN4-204ENST00000357732 PLXNB1O43157 2135 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 SAPCD1Q5SSQ6 148 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 GFRALQ6UXV0 394 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 Q8NA96 180 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 ZNF318Q5VUA4 2279 aa13.95□□□□□ -0.18
RTN4-204ENST00000357732 IL4P05112 153 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 FAM104BQ5XKR9 115 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 NPBQ8NG41 125 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 DMXL2Q8TDJ6 3036 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 NDUFA3O95167 84 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 PPBPP02775 128 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 ORMDL3Q8N138 153 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 C17orf77Q96MU5 243 aa13.94□□□□□ -0.18
RTN4-204ENST00000357732 MALRD1Q5VYJ5 2156 aa13.93□□□□□ -0.18
RTN4-204ENST00000357732 ANKRD11Q6UB99 2663 aaPredicted RBP13.93□□□□□ -0.18
RTN4-204ENST00000357732 NBR2O15453 112 aa13.93□□□□□ -0.18
RTN4-204ENST00000357732 PSMG4Q5JS54 123 aa13.93□□□□□ -0.18
RTN4-204ENST00000357732 MAP1BP46821 2468 aaKnown RBP13.93□□□□□ -0.18
RTN4-204ENST00000357732 TMEM189A5PLL7 270 aa13.93□□□□□ -0.18
RTN4-204ENST00000357732 C2orf91Q6ZV80 131 aa13.93□□□□□ -0.18
RTN4-204ENST00000357732 DCHS1Q96JQ0 3298 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 NPIPB5A8MRT5 1133 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 CD3EP07766 207 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 SRSF2Q01130 221 aaKnown RBP13.92□□□□□ -0.18
RTN4-204ENST00000357732 LY6G5BQ8NDX9 201 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 IGFBPL1Q8WX77 278 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
RTN4-204ENST00000357732 TIMM23O14925 209 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 SIVA1O15304 175 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 SCGB2A1O75556 95 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 COX7A1P24310 79 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 S100A7P31151 101 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 FCGR2BP31994 310 aaPredicted RBP13.91□□□□□ -0.18
RTN4-204ENST00000357732 CEACAM3P40198 252 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 MFAP4P55083 255 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 TCF15Q12870 199 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 PRR30Q53SZ7 412 aaPredicted RBP13.91□□□□□ -0.18
RTN4-204ENST00000357732 OR11H6Q8NGC7 330 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 PRELID3AQ96N28 172 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 SIGLEC8Q9NYZ4 499 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 A0A087X0K7 114 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 A0A096LNJ9 63 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 OR2T8A6NH00 312 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 H0Y8G0 127 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 GNG7O60262 68 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 IFI27P40305 119 aaPredicted RBP13.91□□□□□ -0.18
RTN4-204ENST00000357732 PKDREJQ9NTG1 2253 aa13.91□□□□□ -0.18
RTN4-204ENST00000357732 D6R8Y8 96 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 TMEM97Q5BJF2 176 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 LYZL1Q6UWQ5 148 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 Q71RC1 249 aaPredicted RBP13.9□□□□□ -0.18
RTN4-204ENST00000357732 OR9G4Q8NGQ1 327 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 DPM3Q9P2X0 92 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 HBDP02042 147 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 RPL7P18124 248 aaKnown RBP13.9□□□□□ -0.18
RTN4-204ENST00000357732 BMI1P35226 326 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 ZGRF1Q86YA3 2104 aa13.9□□□□□ -0.18
RTN4-204ENST00000357732 IGLV11-55A0A075B6I3 123 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 LYNX1G3V0Z9 82 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 SH2D1AO60880 128 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 LYNX1P0DP58 116 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 FGF6P10767 208 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 ANKRD39Q53RE8 183 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 A6NDN8 102 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 BOD1L2Q8IYS8 172 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 CFHR4Q92496 578 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 C8orf49Q96NF6 230 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 CST9LQ9H4G1 147 aa13.89□□□□□ -0.19
RTN4-204ENST00000357732 M0R3E3 92 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 PAX8Q06710 450 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 MCRIP2Q9BUT9 160 aaKnown RBP13.88□□□□□ -0.19
RTN4-204ENST00000357732 THYN1Q9P016 225 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 C7orf71A4D174 169 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 NCR2O95944 276 aa13.88□□□□□ -0.19
RTN4-204ENST00000357732 ZFHX2Q9C0A1 2572 aaPredicted RBP13.88□□□□□ -0.19
RTN4-204ENST00000357732 LINC01559Q495D7 138 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 PIFOQ8TCI5 191 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 COL25A1Q9BXS0 654 aaPredicted RBP13.87□□□□□ -0.19
RTN4-204ENST00000357732 PCNX1Q96RV3 2341 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
RTN4-204ENST00000357732 CBY3A6NI87 242 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms