RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 FAM223AQ8IWN6 122 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
RXRA-201ENST00000356384 NEUROG3Q9Y4Z2 214 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 LY96Q9Y6Y9 160 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 SYNJ2BPP57105 145 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 MLANAQ16655 118 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 MST1P26927 711 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 LYPD1Q8N2G4 141 aa13.06□□□□□ -0.32
RXRA-201ENST00000356384 M0R1W7 72 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 DKK1O94907 266 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 DEFB131AP59861 70 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 CFHR3Q02985 330 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 ANKRD36A6QL64 1941 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 GAGE12BA1L429 117 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 IL18BPO95998 194 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 MTCL1Q9Y4B5 1905 aaKnown RBP13.05□□□□□ -0.32
RXRA-201ENST00000356384 C20orf204Q6ZNR8 217 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 Q86TA4 180 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 CEACAM8P31997 349 aaPredicted RBP13.05□□□□□ -0.32
RXRA-201ENST00000356384 PMVKQ15126 192 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 POLEQ07864 2286 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 CD59P13987 128 aa13.05□□□□□ -0.32
RXRA-201ENST00000356384 C5orf63A6NC05 138 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 ZNF561-AS1K7EIQ3 104 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 GAGE12JA6NER3 117 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 GAGE1Q13065 139 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 GAGE4Q13068 117 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 GAGE5Q13069 117 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 LINC00479Q96M42 142 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 SOCS3O14543 225 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 CFHR1Q03591 330 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
RXRA-201ENST00000356384 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
RXRA-201ENST00000356384 LY6HO94772 140 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 PFN2P35080 140 aa13.04□□□□□ -0.32
RXRA-201ENST00000356384 C15orf62A8K5M9 175 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 C9orf153Q5TBE3 101 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 HOXD3P31249 432 aaPredicted RBP13.03□□□□□ -0.32
RXRA-201ENST00000356384 LYPD2Q6UXB3 125 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 TP53TG1Q9Y2A0 90 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 SDK2Q58EX2 2172 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 A0A0G2JNJ9 132 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 CD5LO43866 347 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 TCF15Q12870 199 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 XCL2Q9UBD3 114 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 Q9UFV3 132 aa13.03□□□□□ -0.32
RXRA-201ENST00000356384 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.32
RXRA-201ENST00000356384 RNASE2P10153 161 aaKnown RBP13.02□□□□□ -0.32
RXRA-201ENST00000356384 COL8A2P25067 703 aa13.02□□□□□ -0.32
RXRA-201ENST00000356384 IL17RELQ6ZVW7 336 aa13.02□□□□□ -0.33
RXRA-201ENST00000356384 RNF144BQ7Z419 303 aa13.02□□□□□ -0.33
RXRA-201ENST00000356384 F5H768 121 aa13.02□□□□□ -0.33
RXRA-201ENST00000356384 ZNF581Q9P0T4 197 aa13.02□□□□□ -0.33
RXRA-201ENST00000356384 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 H3BMM0 161 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 GAS1P54826 345 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 Q6P435 159 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 ZNF664Q8N3J9 261 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 UBE2WQ96B02 151 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 SAA4P35542 130 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 CRIPAKQ8N1N5 446 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 NEGR1Q7Z3B1 354 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 NKAPP1Q8N9T2 125 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 SHANK2-AS3Q9BTD1 123 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 RNF114Q9Y508 228 aa13.01□□□□□ -0.33
RXRA-201ENST00000356384 DIDO1Q9BTC0 2240 aaKnown RBP13.01□□□□□ -0.33
RXRA-201ENST00000356384 BPESC1Q9GZL8 116 aa13□□□□□ -0.33
RXRA-201ENST00000356384 TRAV25A0A0B4J276 109 aa13□□□□□ -0.33
RXRA-201ENST00000356384 C3orf56Q8N813 242 aa13□□□□□ -0.33
RXRA-201ENST00000356384 PNRC2Q9NPJ4 139 aaKnown RBP13□□□□□ -0.33
RXRA-201ENST00000356384 A0A0G2JRQ6 117 aa13□□□□□ -0.33
RXRA-201ENST00000356384 IGKV1-16P04430 117 aa13□□□□□ -0.33
RXRA-201ENST00000356384 KLK9Q9UKQ9 250 aa13□□□□□ -0.33
RXRA-201ENST00000356384 UNQ6494/PRO21346Q6UXR6 183 aa13□□□□□ -0.33
RXRA-201ENST00000356384 REG4Q9BYZ8 158 aa13□□□□□ -0.33
RXRA-201ENST00000356384 NDUFS6O75380 124 aaKnown RBP12.99□□□□□ -0.33
RXRA-201ENST00000356384 C8orf49Q96NF6 230 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 SPINK13Q1W4C9 94 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 CFHR2P36980 270 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 HAMPP81172 84 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 LINC01356Q8N9X3 169 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 NXPH4O95158 308 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 SLC25A16P16260 332 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 RUSC1-AS1Q66K80 236 aa12.99□□□□□ -0.33
RXRA-201ENST00000356384 COL6A6A6NMZ7 2263 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 ABCA1O95477 2261 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 SPTBN1Q01082 2364 aaKnown RBP12.98□□□□□ -0.33
RXRA-201ENST00000356384 DAD1P61803 113 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 Q0VFX4 171 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 RSPO3Q9BXY4 272 aaPredicted RBP12.98□□□□□ -0.33
RXRA-201ENST00000356384 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 MAJINQ3KP22 176 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 MORN5Q5VZ52 161 aa12.98□□□□□ -0.33
RXRA-201ENST00000356384 ABCA4P78363 2273 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms