RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 UBE2WQ96B02 151 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 TMEM243Q9BU79 118 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 IGHV1OR15-1A0A075B7D0 117 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 GATA4P43694 442 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 BOD1L2Q8IYS8 172 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 TAF1LQ8IZX4 1826 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 PTPRFP10586 1907 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 IGHV2-70DA0A0C4DH43 119 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 QRFPP83859 136 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 MST1LQ2TV78 715 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 DMRTC2Q8IXT2 367 aaPredicted RBP5.23□□□□□ -1.57
UPF2-201ENST00000356352 AMN1Q8IY45 258 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 ZNF114Q8NC26 417 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 TP53TG1Q9Y2A0 90 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 MYO7AQ13402 2215 aa5.23□□□□□ -1.57
UPF2-201ENST00000356352 A0A0G2JMZ2 1700 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 LRRC37A2A6NM11 1700 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 NUP214P35658 2090 aaPredicted RBP5.22□□□□□ -1.57
UPF2-201ENST00000356352 A6NNC1 897 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 Q0VG73 95 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 UBL5Q9BZL1 73 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 E7EQL1 145 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 H3BUA1 57 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 MMP23AO75900 390 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 LYPD2Q6UXB3 125 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 ZNF833PQ6ZTB9 187 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 COL4A1P02462 1669 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 CNTRLQ7Z7A1 2325 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 GAGE12JA6NER3 117 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 ATP6V0E1O15342 81 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 GAGE1Q13065 139 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 GAGE4Q13068 117 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 GAGE5Q13069 117 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 HS3ST6Q96QI5 342 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 TMEM14CQ9P0S9 112 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 SBF2Q86WG5 1849 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 A0A087WV48 116 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 VWC2Q2TAL6 325 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 SUMO4Q6EEV6 95 aa5.22□□□□□ -1.57
UPF2-201ENST00000356352 A0A087X0K7 114 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 TRAV13-2A0A0B4J235 113 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 C9JAW5 83 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 RNF223E7ERA6 249 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 HGFACQ04756 655 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 DICER1Q9UPY3 1922 aaKnown RBP5.21□□□□□ -1.57
UPF2-201ENST00000356352 NINQ8N4C6 2090 aa5.21□□□□□ -1.57
UPF2-201ENST00000356352 ATG2BQ96BY7 2078 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 A0A1W2PPI3 338 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 K7ENP7 123 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 LINC00311Q8N616 119 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 ZMAT4Q9H898 229 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 SPANXCQ9NY87 97 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 POLR2AP24928 1970 aaKnown RBP5.21□□□□□ -1.58
UPF2-201ENST00000356352 DLEU1O43261 78 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 CDKN1BP46527 198 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 HERVK_113P63121 156 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 UBE2V1Q13404 147 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 TMEM14BQ9NUH8 114 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 TEX48A0A1B0GUV7 120 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 DKK1O94907 266 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 FAM104BQ5XKR9 115 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 C2orf66Q6UXQ4 117 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 CRIPAKQ8N1N5 446 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 ZNF625Q96I27 306 aaPredicted RBP5.21□□□□□ -1.58
UPF2-201ENST00000356352 NDUFA4L2Q9NRX3 87 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 LMO1P25800 156 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 KLF5Q13887 457 aaPredicted RBP5.21□□□□□ -1.58
UPF2-201ENST00000356352 DSCR8Q96T75 97 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 XCL2Q9UBD3 114 aa5.21□□□□□ -1.58
UPF2-201ENST00000356352 GREB1LQ9C091 1923 aaPredicted RBP5.2□□□□□ -1.58
UPF2-201ENST00000356352 TRBV19A0A075B6N1 114 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 SMKR1H3BMG3 65 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 CGB3P0DN86 165 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 CFHR2P36980 270 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 MPV17L2Q567V2 206 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 RUSC1-AS1Q66K80 236 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 IGFL4Q6B9Z1 124 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 IGFL3Q6UXB1 125 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 Q96MF0 132 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 ELANEP08246 267 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 SELENOKQ9Y6D0 94 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 C22orf46C9J442 243 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 H3BRN7 92 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 SPINK8P0C7L1 97 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 PAX9P55771 341 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 ADAMTSL5Q6ZMM2 481 aa5.2□□□□□ -1.58
UPF2-201ENST00000356352 DOCK4Q8N1I0 1966 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 IGHV1-24A0A0C4DH33 117 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 TAL2Q16559 108 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 SPINK13Q1W4C9 94 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 C8orf86Q6ZUL3 223 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 FAM231DQ6ZW35 169 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 OTOFQ9HC10 1997 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 CRLF1O75462 422 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 ZNF134P52741 427 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 TEX36Q5VZQ5 186 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 TMEM256Q8N2U0 113 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 IGKV1-16P04430 117 aa5.19□□□□□ -1.58
UPF2-201ENST00000356352 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms