RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TEX29Q8N6K0 151 aa9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 C5orf30Q96GV9 206 aa9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 PHLDA3Q9Y5J5 127 aa9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 IGKV2-40A0A087WW87 121 aaPredicted RBP9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 PSMB11A5LHX3 300 aa9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 IGKV2D-40P01614 121 aaPredicted RBP9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 SNRPD3P62318 126 aaKnown RBP9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 FBLN7Q53RD9 439 aa9.89□□□□□ -0.83
PCDHB11-201ENST00000354757 MAP1AP78559 2803 aaPredicted RBP9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 OR8A1Q8NGG7 326 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 C8orf46Q8TAG6 207 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 EPDR1Q9UM22 224 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 OVOL3O00110 214 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 NDUFS8O00217 210 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 IGHV4-38-2P0DP08 117 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 TMEM95Q3KNT9 176 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 ASPHD1Q5U4P2 390 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 SSBP4Q9BWG4 385 aaPredicted RBP9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 KLK15Q9H2R5 256 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 YTHDF2Q9Y5A9 579 aaKnown RBP9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 FRYLO94915 3013 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 NPIPB5A8MRT5 1133 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 ZNF688P0C7X2 276 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 CKS2P33552 79 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 RAB9AP51151 201 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 DNLZQ5SXM8 178 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 GPR82Q96P67 336 aa9.88□□□□□ -0.83
PCDHB11-201ENST00000354757 RPL24P83731 157 aaKnown RBP9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 DDB2Q92466 427 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 TRAV1-1A0A0B4J248 108 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 FBLL1A6NHQ2 334 aaKnown RBP9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 PROP1O75360 226 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 DMDP11532 3685 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 K7ERU9 68 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 RNF5Q99942 180 aa9.87□□□□□ -0.83
PCDHB11-201ENST00000354757 LINC00614P0C842 121 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 ACTL10Q5JWF8 245 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 ARL6IP6Q8N6S5 226 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 A0A1W2PRE2 83 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 HIGD1CA8MV81 97 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 SSBP2P81877 361 aaPredicted RBP9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 CIARTQ8N365 385 aaPredicted RBP9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 IGHV4-59P01825 116 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 FBXL19-AS1Q494R0 122 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 ZFP30Q9Y2G7 519 aa9.86□□□□□ -0.83
PCDHB11-201ENST00000354757 ZNF726P1Q15940 193 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 LDLRAD2Q5SZI1 272 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 ZNF841Q6ZN19 808 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 LINC01551Q86U37 167 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 NCOR1P1Q9H4R4 102 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 EMP1P54849 157 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 DGAT2L7PQ6IED9 249 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 FAM159AQ6UWV7 190 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 PIP4P2Q8N4L2 257 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 LINC00311Q8N616 119 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 SNAI2O43623 268 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 SYNJ2BPP57105 145 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 SAPCD1Q5SSQ6 148 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 PSG8Q9UQ74 426 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 IGLV2-14P01704 120 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 BTF3P20290 206 aaKnown RBP9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 BLCAPP62952 87 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 TDRG1Q3Y452 100 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 FAM162BQ5T6X4 162 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 LCN12Q6JVE5 192 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 FAM71F2Q6NXP2 309 aa9.85□□□□□ -0.83
PCDHB11-201ENST00000354757 E7EUB6 86 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 NUDT3O95989 172 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 C1orf122Q6ZSJ8 110 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 Q6ZVH6 145 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 TRGV9Q99603 122 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 DEFB112Q30KQ8 113 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 TMEM116Q8NCL8 245 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 COL4A2P08572 1712 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 HLA-DQA1P01909 254 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 HOXB4P17483 251 aaPredicted RBP9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
PCDHB11-201ENST00000354757 MT-ND6P03923 174 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 TMEM191AQ9H0A3 160 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 ANKRD17O75179 2603 aaKnown RBP9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 DUX3Q96PT4 197 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 OTORQ9NRC9 128 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 JKAMPQ9P055 326 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 PMCHL1Q16048 86 aa9.83□□□□□ -0.84
PCDHB11-201ENST00000354757 FREM2Q5SZK8 3169 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 COX19Q49B96 90 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 Q8N7P7 452 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 SIGLEC15Q6ZMC9 328 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 CENPVL3A0A0U1RRI6 287 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
PCDHB11-201ENST00000354757 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms