RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SPANXN5Q5MJ07 72 aa8.72□□□□□ -1.01
SND1-201ENST00000354725 Q6ZR03 302 aa8.72□□□□□ -1.01
SND1-201ENST00000354725 GCN1Q92616 2671 aaKnown RBP8.71□□□□□ -1.01
SND1-201ENST00000354725 AMY1AP04745 511 aa8.71□□□□□ -1.01
SND1-201ENST00000354725 FGF6P10767 208 aa8.71□□□□□ -1.01
SND1-201ENST00000354725 LINC00173Q6ZV60 143 aa8.71□□□□□ -1.01
SND1-201ENST00000354725 PRELID3AQ96N28 172 aa8.71□□□□□ -1.01
SND1-201ENST00000354725 TECRQ9NZ01 308 aaKnown RBP8.71□□□□□ -1.01
SND1-201ENST00000354725 C15orf62A8K5M9 175 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 C12orf77C9JDV5 145 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 SRD5A1P18405 259 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 G6PCP35575 357 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 ATP5G3P48201 142 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 TFF3Q07654 80 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 GAGE13Q4V321 117 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 MDP1Q86V88 176 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 COQ2Q96H96 371 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 SLC25A39Q9BZJ4 359 aaPredicted RBP8.71□□□□□ -1.02
SND1-201ENST00000354725 TTC32Q5I0X7 151 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 TEPPQ6URK8 271 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 OR13A1Q8NGR1 328 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 IL1F10Q8WWZ1 152 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 WDR83OSQ9Y284 106 aa8.71□□□□□ -1.02
SND1-201ENST00000354725 USF3Q68DE3 2245 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 H3BMG7 143 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 FAM159AQ6UWV7 190 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 FAM90A1Q86YD7 464 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 KCNIP2Q9NS61 270 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 MGST1P10620 155 aaKnown RBP8.7□□□□□ -1.02
SND1-201ENST00000354725 KLF5Q13887 457 aaPredicted RBP8.7□□□□□ -1.02
SND1-201ENST00000354725 TMEM101Q96IK0 257 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 V9GYV3 84 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 A0A1B0GWB2 263 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 C17orf98A8MV24 154 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 C15orf65H3BRN8 121 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 C11orf44Q8N8P7 122 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 PLPPR2Q96GM1 343 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 SPRR3Q9UBC9 169 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 SIGLEC9Q9Y336 463 aa8.7□□□□□ -1.02
SND1-201ENST00000354725 AKAP9Q99996 3911 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 LINC00473A8K010 186 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 ZG16O60844 167 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 PROP1O75360 226 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 SLC35B1P78383 322 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 A1L4Q6 167 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 COX5AP20674 150 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 LRRC29Q8WV35 223 aa8.69□□□□□ -1.02
SND1-201ENST00000354725 H1FXQ92522 213 aaKnown RBP8.69□□□□□ -1.02
SND1-201ENST00000354725 TMEM30CPA0ZSE6 113 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 FAM53AQ6NSI3 398 aaPredicted RBP8.68□□□□□ -1.02
SND1-201ENST00000354725 OR4X2Q8NGF9 303 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 COL12A1Q99715 3063 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 J3KT08 172 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 SRYQ05066 204 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 Q96MF0 132 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 KIR2DL4Q99706 377 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 SAP30LQ9HAJ7 183 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 LSM4Q9Y4Z0 139 aaKnown RBP8.68□□□□□ -1.02
SND1-201ENST00000354725 VPS13CQ709C8 3753 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 LEPROTL1O95214 131 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 PSG5Q15238 335 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 LINC01561Q8N1V8 128 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 SLC25A33Q9BSK2 321 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 COL6A6A6NMZ7 2263 aa8.68□□□□□ -1.02
SND1-201ENST00000354725 TANC2Q9HCD6 1990 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 ZNF718Q3SXZ3 478 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 SSX8Q7RTT4 187 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 GNG12Q9UBI6 72 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 ADGRG4Q8IZF6 3080 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 E9PLD3 99 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 SLC25A5P05141 298 aaKnown RBP8.67□□□□□ -1.02
SND1-201ENST00000354725 IFITM1P13164 125 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 OPRK1P41145 380 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 URB1-AS1Q96HZ7 61 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 IDI2-AS1Q9NZ38 188 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 DUSP13Q9UII6 198 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 PRNDQ9UKY0 176 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
SND1-201ENST00000354725 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 LINC01559Q495D7 138 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 C11orf52Q96A22 123 aa8.67□□□□□ -1.02
SND1-201ENST00000354725 MOSP00540 346 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 PHLDA1Q8WV24 401 aaPredicted RBP8.66□□□□□ -1.02
SND1-201ENST00000354725 PRO0628Q9UI54 55 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 TRGV8A0A0C4DH27 118 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 EVI2AP22794 236 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 IGHV1-2P23083 117 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 TAS2R45P59539 299 aa8.66□□□□□ -1.02
SND1-201ENST00000354725 PLA2G2AP14555 144 aa8.65□□□□□ -1.02
SND1-201ENST00000354725 DUTP33316 252 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms