RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MRGPRG-AS1Q2M3A8 158 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 DYNAPQ8N1N2 210 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 C8orf31Q8N9H6 132 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 OR4A5Q8NH83 315 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 CBY1Q9Y3M2 126 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 UNC79Q9P2D8 2635 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 GOSR1O95249 250 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 NBEAP1P0C6P0 100 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 APELAP0DMC3 54 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 CNTFRP26992 372 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 LEMD1Q68G75 181 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 STXBP6Q8NFX7 210 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM70Q9BUB7 260 aa6.8□□□□□ -1.32
TRIM55-204ENST00000353317 RPP21Q9H633 154 aaKnown RBP6.8□□□□□ -1.32
TRIM55-204ENST00000353317 ITPR3Q14573 2671 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 IGLC7A0M8Q6 106 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 CRXO43186 299 aaPredicted RBP6.79□□□□□ -1.32
TRIM55-204ENST00000353317 LTAP01374 205 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 LINC00173Q6ZV60 143 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 VMO1Q7Z5L0 202 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 TMEM186Q96B77 213 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 SMIM12Q96EX1 92 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 AJUBAQ96IF1 538 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 SIRPDQ9H106 197 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 WASHC3Q9Y3C0 194 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 COX11Q9Y6N1 276 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV3-21A0A0B4J1V1 117 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV1-24A0A0C4DH33 117 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 C19orf71A6NCJ1 209 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 J3QKU1 62 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 TOMM40O96008 361 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 P01737 135 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 CRYGCP07315 174 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 GP9P14770 177 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 PGLYRP4Q96LB8 373 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 PSMG3-AS1Q96PY0 264 aa6.79□□□□□ -1.32
TRIM55-204ENST00000353317 AKAP9Q99996 3911 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV2-70DA0A0C4DH43 119 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 OR4C46A6NHA9 309 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 A8MWL6 223 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 RBP4P02753 201 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 TCRAP04437 139 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 PRTN3P24158 256 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 MAPK1IP1LQ8NDC0 245 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 TRAV8-1A0A0A6YYK1 113 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 IGHV1-3A0A0C4DH29 117 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 ODF3BA8MYP8 253 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 HOXB4P17483 251 aaPredicted RBP6.78□□□□□ -1.32
TRIM55-204ENST00000353317 UBE2V1Q13404 147 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 C21orf62-AS1Q17RA5 79 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 CT83Q5H943 113 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 FAM71F2Q6NXP2 309 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 Q71RC1 249 aaPredicted RBP6.78□□□□□ -1.32
TRIM55-204ENST00000353317 C5orf17Q8NAS9 161 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 ZNF738Q8NE65 137 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 OR11H6Q8NGC7 330 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 FMC1Q96HJ9 113 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 Q9H3A6 140 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 GSX1Q9H4S2 264 aaPredicted RBP6.78□□□□□ -1.32
TRIM55-204ENST00000353317 HILPDAQ9Y5L2 63 aa6.78□□□□□ -1.32
TRIM55-204ENST00000353317 ACANP16112 2415 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 A0A096LNT2 108 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 SYS1-DBNDD2H3BUS1 97 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 M0R1W7 72 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 VMA21Q3ZAQ7 101 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 TMEM116Q8NCL8 245 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 RNASE8Q8TDE3 154 aaKnown RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 TRGV9Q99603 122 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 SOX21Q9Y651 276 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 ENSAO43768 121 aaKnown RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 PCP4P48539 62 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 ZNF138P52744 262 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 PVRIGQ6DKI7 326 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 ETFRF1Q6IPR1 90 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 RBPMS2Q6ZRY4 209 aaKnown RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 CIARTQ8N365 385 aaPredicted RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 CHCHD1Q96BP2 118 aaKnown RBP6.77□□□□□ -1.33
TRIM55-204ENST00000353317 ZNF492Q9P255 531 aa6.77□□□□□ -1.33
TRIM55-204ENST00000353317 CREBBPQ92793 2442 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 MPV17L2Q567V2 206 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 DAZAP1Q96EP5 407 aaKnown RBP6.76□□□□□ -1.33
TRIM55-204ENST00000353317 PIMREGQ9BSJ6 248 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 MCRIP2Q9BUT9 160 aaKnown RBP6.76□□□□□ -1.33
TRIM55-204ENST00000353317 GFRA4Q9GZZ7 299 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 C1RLQ9NZP8 487 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 FLNAP21333 2647 aaKnown RBP6.76□□□□□ -1.33
TRIM55-204ENST00000353317 IGHV3OR16-10A0A075B7F0 116 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 LOC102724200A0A096LPH7 203 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-204ENST00000353317 NPIPB6E9PJ23 425 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 TIMM23O14925 209 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 IGLV2-11P01706 119 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 APOHP02749 345 aaPredicted RBP6.76□□□□□ -1.33
TRIM55-204ENST00000353317 MC5RP33032 325 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 FAM162BQ5T6X4 162 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 CLEC2AQ6UVW9 174 aa6.76□□□□□ -1.33
TRIM55-204ENST00000353317 C1orf122Q6ZSJ8 110 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms