RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZGRF1Q86YA3 2104 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 PLCE1Q9P212 2302 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 TRBV25-1A0A075B6N4 114 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 IGLL5B9A064 214 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 FOXI2Q6ZQN5 318 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 DSCAMO60469 2012 aa6.09□□□□□ -1.43
BRCA1-201ENST00000352993 NPYP01303 97 aa6.09□□□□□ -1.44
BRCA1-201ENST00000352993 EVI2AP22794 236 aa6.09□□□□□ -1.44
BRCA1-201ENST00000352993 MRPL51Q4U2R6 128 aaKnown RBP6.09□□□□□ -1.44
BRCA1-201ENST00000352993 ZNF418Q8TF45 676 aaPredicted RBP6.09□□□□□ -1.44
BRCA1-201ENST00000352993 LOC107984156A0A0G2JMH3 177 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 M0R3E3 92 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 IGKCP01834 107 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 MBNL2Q5VZF2 373 aaKnown RBP6.08□□□□□ -1.44
BRCA1-201ENST00000352993 ARL17AQ8IVW1 177 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 CEND1Q8N111 149 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 ZCCHC24Q8N2G6 241 aaKnown RBP6.08□□□□□ -1.44
BRCA1-201ENST00000352993 C17orf77Q96MU5 243 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 SPRR3Q9UBC9 169 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 RALYQ9UKM9 306 aaKnown RBP6.08□□□□□ -1.44
BRCA1-201ENST00000352993 M0R1B8 84 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 VMA21Q3ZAQ7 101 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 FAM104BQ5XKR9 115 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 RUSC1-AS1Q66K80 236 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 TTC9CQ8N5M4 171 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 C8orf49Q96NF6 230 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 PLSCR4Q9NRQ2 329 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 MRPL16Q9NX20 251 aaKnown RBP6.08□□□□□ -1.44
BRCA1-201ENST00000352993 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 RPUSD1Q9UJJ7 312 aaKnown RBP6.08□□□□□ -1.44
BRCA1-201ENST00000352993 CEP250Q9BV73 2442 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 DSCAML1Q8TD84 2053 aa6.08□□□□□ -1.44
BRCA1-201ENST00000352993 A0A1B0GW15 77 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 GP9P14770 177 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 CCL3L1P16619 93 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 OR4C13Q8NGP0 309 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 C8orf46Q8TAG6 207 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 MAP1LC3AQ9H492 121 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 TPSG1Q9NRR2 321 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 A0A1W2PPI3 338 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 K7ESF4 209 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 DIAPH2-AS1Q14236 149 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 C12orf74Q32Q52 190 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 SPATA25Q9BR10 227 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 CYSLTR1Q9Y271 337 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 Q6ZT83 130 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 THAP8Q8NA92 274 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM178AQ8NBL3 297 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 RASL11BQ9BPW5 248 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 RNF7Q9UBF6 113 aa6.07□□□□□ -1.44
BRCA1-201ENST00000352993 PKDREJQ9NTG1 2253 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TRAV40A0A0B4J280 105 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 NDUFA3O95167 84 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 FSTL3O95633 263 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 SLC25A39Q9BZJ4 359 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-201ENST00000352993 WNK2Q9Y3S1 2297 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM8BA6NDV4 472 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 NPIPB5A8MRT5 1133 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 E9PLD3 99 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 H3BVH4 76 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 DPM2O94777 84 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 ORM1P02763 201 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 PSMB2P49721 201 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 LPAL2Q16609 132 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 KLF17Q5JT82 389 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-201ENST00000352993 Q6AWC8 147 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 C8orf86Q6ZUL3 223 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TGFAP01135 160 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 RPL27AP46776 148 aaKnown RBP6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TNFAIP6P98066 277 aaPredicted RBP6.06□□□□□ -1.44
BRCA1-201ENST00000352993 PLGLAQ15195 96 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TCTEX1D4Q5JR98 221 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 FER1L6-AS2Q96M78 137 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 SRSF8Q9BRL6 282 aaKnown RBP6.06□□□□□ -1.44
BRCA1-201ENST00000352993 ANAPC13Q9BS18 74 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM133Q9H2Q1 129 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 POLEQ07864 2286 aa6.06□□□□□ -1.44
BRCA1-201ENST00000352993 IGHV1-18A0A0C4DH31 117 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 IGKV3-15P01624 115 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 CGB3P0DN86 165 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 CGB7P0DN87 165 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 PRB3Q04118 309 aaPredicted RBP6.05□□□□□ -1.44
BRCA1-201ENST00000352993 CR1LQ2VPA4 569 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM167AQ8TBQ9 72 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 GLMPQ8WWB7 406 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 RPEQ96AT9 228 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 TRGV9Q99603 122 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 SCNM1Q9BWG6 230 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 AAMDCQ9H7C9 122 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 S4R3C0 116 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 NCBP2LA6PVI3 153 aaKnown RBP6.05□□□□□ -1.44
BRCA1-201ENST00000352993 IGLV2-11P01706 119 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM105Q8N8V8 129 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 TMEM158Q8WZ71 300 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 NGBQ9NPG2 151 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 PRRG2O14669 202 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 CRIP1P50238 77 aa6.05□□□□□ -1.44
BRCA1-201ENST00000352993 MYOZ3Q8TDC0 251 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms