RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MDP1Q86V88 176 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
IFT88-202ENST00000351808 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 A0A1W2PR77 199 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 EVI2AP22794 236 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
IFT88-202ENST00000351808 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 TMEM160Q9NX00 188 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 U3KQK5 164 aa10.54□□□□□ -0.72
IFT88-202ENST00000351808 PRR14LQ5THK1 2151 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 NDUFV3P56181 108 aaKnown RBP10.53□□□□□ -0.72
IFT88-202ENST00000351808 TAL2Q16559 108 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 Q6ZS92 163 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 CD177Q8N6Q3 437 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 PRR7Q8TB68 274 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 FOXC2Q99958 501 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 CITED1Q99966 193 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 LOC107984156A0A0G2JMH3 177 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 TMEM8BA6NDV4 472 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 IGLV2-11P01706 119 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 IGKV1-16P04430 117 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 ZFP2Q6ZN57 461 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 ARL17AQ8IVW1 177 aa10.53□□□□□ -0.72
IFT88-202ENST00000351808 A0A087WX48 190 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 IGHV1-45A0A0A0MS14 117 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 HOXA3O43365 443 aaPredicted RBP10.52□□□□□ -0.72
IFT88-202ENST00000351808 ZNF493Q6ZR52 646 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 Q6ZS52 159 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 TEN1Q86WV5 123 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 C8orf46Q8TAG6 207 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 IMMP1LQ96LU5 166 aa10.52□□□□□ -0.72
IFT88-202ENST00000351808 MRPS17Q9Y2R5 130 aaKnown RBP10.52□□□□□ -0.72
IFT88-202ENST00000351808 PLXNB1O43157 2135 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 IGKV3D-15A0A087WSY6 115 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 TRAV40A0A0B4J280 105 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 ZNF688P0C7X2 276 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 CKS2P33552 79 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 PSMG4Q5JS54 123 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 EXOC3-AS1Q8N2X6 119 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
IFT88-202ENST00000351808 SHISA9B4DS77 424 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 E7EUB6 86 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 C5orf67F2Z3F1 127 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 RHODO00212 210 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 IL4P05112 153 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 LEPP41159 167 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
IFT88-202ENST00000351808 TRBV7-3A0A075B6L6 115 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 LINC01565O15544 149 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 SCGB2A1O75556 95 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 DPM2O94777 84 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 SRD5A1P18405 259 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 GAGE2EQ4V326 116 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 LYZL1Q6UWQ5 148 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 YAE1D1Q9NRH1 226 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 GAGE2DQ9UEU5 116 aa10.51□□□□□ -0.73
IFT88-202ENST00000351808 MRPL14Q6P1L8 145 aaKnown RBP10.51□□□□□ -0.73
IFT88-202ENST00000351808 COX6A1P12074 109 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 PRDX2P32119 198 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 ATP5IP56385 69 aaPredicted RBP10.5□□□□□ -0.73
IFT88-202ENST00000351808 ERHP84090 104 aaKnown RBP10.5□□□□□ -0.73
IFT88-202ENST00000351808 POU2AF1Q16633 256 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 TMEM133Q9H2Q1 129 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 PINLYPA6NC86 204 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 GP9P14770 177 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 CRIP1P50238 77 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 TTC32Q5I0X7 151 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 RUSC1-AS1Q66K80 236 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 C12orf49Q9H741 205 aa10.5□□□□□ -0.73
IFT88-202ENST00000351808 LINC01549A6NIU2 74 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 IGLV3-19P01714 112 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 TBC1D28Q2M2D7 210 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 TRAV4A0A0B4J268 109 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 H3BVH4 76 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 SAA1P0DJI8 122 aaPredicted RBP10.49□□□□□ -0.73
IFT88-202ENST00000351808 FAM159AQ6UWV7 190 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 PPP1R35Q8TAP8 253 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 FBXL15Q9H469 300 aa10.49□□□□□ -0.73
IFT88-202ENST00000351808 C1orf210Q8IVY1 113 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 SLC25A45Q8N413 288 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 VCX2Q9H322 139 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 PPDPFQ9H3Y8 114 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
IFT88-202ENST00000351808 IQCF6A8MYZ5 107 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 CRLF1O75462 422 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 THBDP07204 575 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 TWIST1Q15672 202 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 CALYQ9NYX4 217 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 TMEM262E9PQX1 116 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 GAS8-AS1O95177 125 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 TNFRSF1AP19438 455 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 ZNRF1Q8ND25 227 aa10.48□□□□□ -0.73
IFT88-202ENST00000351808 A0A1W2PQM1 296 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 TGFAP01135 160 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 IFITM1P13164 125 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 C10orf55Q5SWW7 151 aa10.47□□□□□ -0.73
IFT88-202ENST00000351808 NDUFA4L2Q9NRX3 87 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms