RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 Q5PR19 223 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 TOMM20LQ6UXN7 152 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 FMC1Q96HJ9 113 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 GPR82Q96P67 336 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 PRDM13Q9H4Q3 707 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 U3KQE9 123 aa5.36□□□□□ -1.55
TRIM55-203ENST00000350034 FLNAP21333 2647 aaKnown RBP5.36□□□□□ -1.55
TRIM55-203ENST00000350034 A0A087X0K7 114 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 SMIM27A0A1W2PRY6 76 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 BMPR1BO00238 502 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 IGLV1-40P01703 118 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 S100A6P06703 90 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 S100A7P31151 101 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 IER3P46695 156 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 RAB9AP51151 201 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 ERVFC1-1P60608 527 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 FABP9Q0Z7S8 132 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 CLEC19AQ6UXS0 136 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 Q6ZS46 218 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 EXOC3-AS1Q8N2X6 119 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 USMG5Q96IX5 58 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 MS4A10Q96PG2 267 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 PRSS22Q9GZN4 317 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 RNASE7Q9H1E1 156 aaKnown RBP5.35□□□□□ -1.55
TRIM55-203ENST00000350034 ZNF492Q9P255 531 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 RABAC1Q9UI14 185 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 SMAD5-AS1Q9Y6J3 95 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 WNK2Q9Y3S1 2297 aa5.35□□□□□ -1.55
TRIM55-203ENST00000350034 NBEAL2Q6ZNJ1 2754 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 ABCA1O95477 2261 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.34□□□□□ -1.55
TRIM55-203ENST00000350034 SERTM2A0A1B0GWG4 89 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 C19orf71A6NCJ1 209 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 ZNF785A8K8V0 405 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 BUB3O43684 328 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 TRGV3P03979 118 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 MGST1P10620 155 aaKnown RBP5.34□□□□□ -1.55
TRIM55-203ENST00000350034 CDX1P47902 265 aaPredicted RBP5.34□□□□□ -1.55
TRIM55-203ENST00000350034 NDUFA6P56556 154 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 UBE2G1P62253 170 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 BLCAPP62952 87 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 PSG9Q00887 426 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 RELQ04864 619 aaPredicted RBP5.34□□□□□ -1.55
TRIM55-203ENST00000350034 RPEL1Q2QD12 228 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 IBA57Q5T440 356 aaKnown RBP5.34□□□□□ -1.55
TRIM55-203ENST00000350034 C1orf194Q5T5A4 169 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 C16orf54Q6UWD8 224 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 Q6YL49 198 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 Q86TA4 180 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 TMEM183AQ8IXX5 376 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 LINC00518Q8N0U6 118 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 TMEM75Q8N9X5 138 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 MAPK1IP1LQ8NDC0 245 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 NUDT10Q8NFP7 164 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 OR5R1Q8NH85 324 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 CMTM2Q8TAZ6 248 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 NUDT11Q96G61 164 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 GRAMD2BQ96HH9 432 aa5.34□□□□□ -1.55
TRIM55-203ENST00000350034 TMEM89A2RUT3 159 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 IZUMO1RA6ND01 250 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 ZNF705GA8MUZ8 300 aaPredicted RBP5.33□□□□□ -1.56
TRIM55-203ENST00000350034 DIRC3C9JPN6 131 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 NPIPB6E9PJ23 425 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 GATCO43716 136 aaKnown RBP5.33□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV4-59P01825 116 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 IGHG4P01861 327 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 PSG3Q16557 428 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 COX19Q49B96 90 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 CT83Q5H943 113 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 C9orf152Q5JTZ5 239 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 CYB5R2Q6BCY4 276 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 LINC00322Q6ZN03 302 aaPredicted RBP5.33□□□□□ -1.56
TRIM55-203ENST00000350034 GOLT1AQ6ZVE7 132 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 COX8CQ7Z4L0 72 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 OR8I2Q8N0Y5 310 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 NHLRC2Q8NBF2 726 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 Q96MF0 132 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 NOL4LQ96MY1 436 aaPredicted RBP5.33□□□□□ -1.56
TRIM55-203ENST00000350034 MDFIQ99750 246 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 ZNF331Q9NQX6 463 aaPredicted RBP5.33□□□□□ -1.56
TRIM55-203ENST00000350034 LINC00527Q9UJ94 153 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 ZFP30Q9Y2G7 519 aa5.33□□□□□ -1.56
TRIM55-203ENST00000350034 TRAV8-1A0A0A6YYK1 113 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 IGHV3-35A0A0C4DH35 117 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 FBLL1A6NHQ2 334 aaKnown RBP5.32□□□□□ -1.56
TRIM55-203ENST00000350034 M0R3E3 92 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 S100A8P05109 93 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 AKR1D1P51857 326 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 TPPP2P59282 170 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 RASL11AQ6T310 242 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 HIST3H2BBQ8N257 126 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 OR4B1Q8NGF8 309 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 WIPF2Q8TF74 440 aaPredicted RBP5.32□□□□□ -1.56
TRIM55-203ENST00000350034 TSKUQ8WUA8 353 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 SGK494Q96LW2 274 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 GNB1LQ9BYB4 327 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 KLK15Q9H2R5 256 aa5.32□□□□□ -1.56
TRIM55-203ENST00000350034 AAMDCQ9H7C9 122 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms