RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 MUC21A0A0G2JKD1 596 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 MUC21A0A140T8X8 626 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 M0R3E3 92 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 IGHV4-39P01824 125 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 MUC21Q5SSG8 566 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 ZNF738Q8NE65 137 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 CCL19Q99731 98 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 WNK1Q9H4A3 2382 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 TMSB15BA0A087X1C1 80 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 BMPR1BO00238 502 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 TSKUQ8WUA8 353 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 FXYD5Q96DB9 178 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 CDC42EP3Q9UKI2 254 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 SLAQ13239 276 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
TRIM4-201ENST00000349062 ALKBH7Q9BT30 221 aaPredicted RBP10.98□□□□□ -0.65
TRIM4-201ENST00000349062 IGKV3-7A0A075B6H7 116 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 SNAI2O43623 268 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 IGLC1P0CG04 106 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 TSPOP30536 169 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 COTL1Q14019 142 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 C8orf31Q8N9H6 132 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 LY6G5BQ8NDX9 201 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 Q9H3A6 140 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 LY6LH3BQJ8 138 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 CRYGBP07316 175 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 GPR183P32249 361 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 WDR73Q6P4I2 378 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 TMEM136Q6ZRR5 245 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 ZNF329Q86UD4 541 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 ZC2HC1AQ96GY0 325 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 GNB1LQ9BYB4 327 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 MRPL32Q9BYC8 188 aaKnown RBP10.97□□□□□ -0.65
TRIM4-201ENST00000349062 SLC25A39Q9BZJ4 359 aaPredicted RBP10.97□□□□□ -0.65
TRIM4-201ENST00000349062 IGKV1-17P01599 117 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 Q0VG73 95 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 TCF24Q7RTU0 167 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 CFHR4Q92496 578 aa10.97□□□□□ -0.65
TRIM4-201ENST00000349062 IGHV4-61A0A0C4DH41 118 aa10.96□□□□□ -0.65
TRIM4-201ENST00000349062 K7EIM0 57 aa10.96□□□□□ -0.65
TRIM4-201ENST00000349062 DTX2Q86UW9 622 aa10.96□□□□□ -0.65
TRIM4-201ENST00000349062 PSMB11A5LHX3 300 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 LCNL1Q6ZST4 164 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 CIARTQ8N365 385 aaPredicted RBP10.96□□□□□ -0.66
TRIM4-201ENST00000349062 OR11H6Q8NGC7 330 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 A0A1W2PRE2 83 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 CSN3P07498 182 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 ATP5IP56385 69 aaPredicted RBP10.96□□□□□ -0.66
TRIM4-201ENST00000349062 NIT1Q86X76 327 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.66
TRIM4-201ENST00000349062 CHD6Q8TD26 2715 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 FNDC10F2Z333 226 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 I3L2K1 104 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 Q8N976 141 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 TMEM116Q8NCL8 245 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 FAM106CPP0CH98 169 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 CCDC144NLQ6NUI1 221 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 TXNDC17Q9BRA2 123 aa10.95□□□□□ -0.66
TRIM4-201ENST00000349062 PRRC2AP48634 2157 aaKnown RBP10.95□□□□□ -0.66
TRIM4-201ENST00000349062 M0R1W7 72 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 IGLL1P15814 213 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 DAZAP1Q96EP5 407 aaKnown RBP10.94□□□□□ -0.66
TRIM4-201ENST00000349062 C19orf24Q9BVV8 132 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 EPDR1Q9UM22 224 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 TEX15Q9BXT5 2789 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 THAP8Q8NA92 274 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 C8orf46Q8TAG6 207 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 RNF125Q96EQ8 232 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 TRGV9Q99603 122 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 C21orf62Q9NYP8 219 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 IGHV2-70DA0A0C4DH43 119 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 hDV102S1A0JD36 115 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 NUDT3O95989 172 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 HLA-DQA1P01909 254 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 LMO4P61968 165 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 UBE2V1Q13404 147 aa10.94□□□□□ -0.66
TRIM4-201ENST00000349062 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 MT-ND6P03923 174 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 CLEC19AQ6UXS0 136 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 ZNF138P52744 262 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 PGLYRP4Q96LB8 373 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 CHRDL1Q9BU40 450 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 COX11Q9Y6N1 276 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 CTRLP40313 264 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 EBLN2Q6P2I7 272 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 OR4F17Q8NGA8 305 aa10.93□□□□□ -0.66
TRIM4-201ENST00000349062 HLA-DMBP28068 263 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 MFAP4P55083 255 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 TMEM249Q2WGJ8 235 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 C11orf52Q96A22 123 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 C7orf69Q9H7B7 122 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 J3KRW8 73 aa10.92□□□□□ -0.66
TRIM4-201ENST00000349062 CLEC3BP05452 202 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms