RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 SUN5Q8TC36 379 aa9.47□□□□□ -0.89
ERGIC3-202ENST00000348547 CITED4Q96RK1 184 aa9.47□□□□□ -0.89
ERGIC3-202ENST00000348547 HRH4Q9H3N8 390 aa9.47□□□□□ -0.89
ERGIC3-202ENST00000348547 TRBV19A0A075B6N1 114 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 ATP6V1G1O75348 118 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 MBP02144 154 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF688P0C7X2 276 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 GALR1P47211 349 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 EIF5AP63241 154 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 LCN15Q6UWW0 184 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 RBPMS2Q6ZRY4 209 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 BPIFA4PQ86YQ2 179 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 MBD3L1Q8WWY6 194 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 NARS2Q96I59 477 aaKnown RBP9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 PAXXQ9BUH6 204 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 MAP6D1Q9H9H5 199 aa9.46□□□□□ -0.9
ERGIC3-202ENST00000348547 MAP1LC3B2A6NCE7 125 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 UMAD1C9J7I0 102 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 OR7C2O60412 319 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 GCHFRP30047 84 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 UBE2L3P68036 154 aaKnown RBP9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 KHDC3LQ587J8 217 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 TEX261Q6UWH6 196 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF680Q8NEM1 530 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 RNF141Q8WVD5 230 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 GPR82Q96P67 336 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 ACTR3CQ9C0K3 210 aaPredicted RBP9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 MAP1LC3BQ9GZQ8 125 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 OR51M1Q9H341 326 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 UBQLN2Q9UHD9 624 aa9.45□□□□□ -0.9
ERGIC3-202ENST00000348547 TRAV2A0A0B4J234 112 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 A0A1B0GV50 99 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 A0A1W2PPV4 95 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 PRAC2D3DTV9 90 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 K7EIL1 84 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 HIST1H1EP10412 219 aaKnown RBP9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 BMI1P35226 326 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 GDF5OSQ5U4N7 250 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 APRG1Q8IVJ8 170 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 BLNKQ8WV28 456 aa9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 AURKAIP1Q9NWT8 199 aaPredicted RBP9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 YTHDF2Q9Y5A9 579 aaKnown RBP9.44□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF705FA8MVS1 300 aaPredicted RBP9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 F6UB75 175 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 M0R3E3 92 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 NBEAP1P0C6P0 100 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 C4BPBP20851 252 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 CD81P60033 236 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 EXOC3-AS1Q8N2X6 119 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 PFDN2Q9UHV9 154 aa9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 HUWE1Q7Z6Z7 4374 aaKnown RBP9.43□□□□□ -0.9
ERGIC3-202ENST00000348547 OR4C46A6NHA9 309 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 ISLRO14498 428 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 CD5P06127 495 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 PSMG4Q5JS54 123 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 DPPA3Q6W0C5 159 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 PQLC2Q6ZP29 291 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 DEFB125Q8N687 156 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 SFT2D1Q8WV19 159 aa9.42□□□□□ -0.9
ERGIC3-202ENST00000348547 TRAV1-1A0A0B4J248 108 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 RBMY1BA6NDE4 496 aaKnown RBP9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 RBMY1EA6NEQ0 496 aaKnown RBP9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 DNASE2O00115 360 aaPredicted RBP9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 CXorf1O96002 111 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 RBMY1DP0C7P1 496 aaKnown RBP9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 PSMB3P49720 205 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 TAS2R45P59539 299 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 DEFB131AP59861 70 aa9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 EIF5AL1Q6IS14 154 aaKnown RBP9.41□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF705EA8MWA4 302 aaPredicted RBP9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF253O75346 499 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 NMBP08949 121 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 H2AFB1P0C5Y9 115 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF705DP0CH99 300 aaPredicted RBP9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 ZNF705BP0CI00 300 aaPredicted RBP9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 RAB5CP51148 216 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 RANP62826 216 aaKnown RBP9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 GUK1Q16774 197 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 S100A7AQ86SG5 101 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 LYPD6BQ8NI32 183 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 C16orf92Q96LL3 132 aa9.4□□□□□ -0.9
ERGIC3-202ENST00000348547 TEX46H3BTG2 121 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 S100A7P31151 101 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 MEOX2P50222 304 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 UBE2G2P60604 165 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 PDE6HQ13956 83 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 ICAM4Q14773 271 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 PSG3Q16557 428 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 LINC00052Q96N35 136 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 Q9H3A6 140 aa9.39□□□□□ -0.91
ERGIC3-202ENST00000348547 FAM74A7A6NL05 159 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms