RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 HAX1O00165 279 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 ITLN2Q8WWU7 325 aaPredicted RBP14.17□□□□□ -0.14
SPAST-202ENST00000345662 BRWD3Q6RI45 1802 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 PDE6HQ13956 83 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 SHANK2-AS3Q9BTD1 123 aa14.17□□□□□ -0.14
SPAST-202ENST00000345662 PRSS46E5RG02 174 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 Q6ZVH6 145 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 EDA2RQ9HAV5 297 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 PLXNA3P51805 1871 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 TRPM7Q96QT4 1865 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 ZDBF2Q9HCK1 2354 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 ETV2O00321 342 aaPredicted RBP14.16□□□□□ -0.14
SPAST-202ENST00000345662 ZSWIM8A7E2V4 1837 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 IGHV2-70DA0A0C4DH43 119 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 CEACAM8P31997 349 aaPredicted RBP14.16□□□□□ -0.14
SPAST-202ENST00000345662 C15orf32Q32M92 178 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 C14orf178Q8N769 122 aaPredicted RBP14.16□□□□□ -0.14
SPAST-202ENST00000345662 SIGLEC9Q9Y336 463 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 WNT2P09544 360 aa14.16□□□□□ -0.14
SPAST-202ENST00000345662 VWC2Q2TAL6 325 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 CFAP161Q6P656 301 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 TRAV8-3A0A0A6YYJ7 113 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 ZNF876PQ49A33 203 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 GAFA1Q96PS6 74 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 SIVA1O15304 175 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 DEFB125Q8N687 156 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 PLSCR4Q9NRQ2 329 aa14.15□□□□□ -0.14
SPAST-202ENST00000345662 LMO1P25800 156 aa14.14□□□□□ -0.15
SPAST-202ENST00000345662 C9orf139Q6ZV77 190 aa14.14□□□□□ -0.15
SPAST-202ENST00000345662 RNASE6Q93091 150 aaKnown RBP14.14□□□□□ -0.15
SPAST-202ENST00000345662 ZNF474Q6S9Z5 364 aaPredicted RBP14.14□□□□□ -0.15
SPAST-202ENST00000345662 SLC25A20O43772 301 aa14.14□□□□□ -0.15
SPAST-202ENST00000345662 HIST1H4AP62805 103 aaKnown RBP14.14□□□□□ -0.15
SPAST-202ENST00000345662 LTBRP36941 435 aa14.14□□□□□ -0.15
SPAST-202ENST00000345662 ATP5J2P56134 94 aa14.14□□□□□ -0.15
SPAST-202ENST00000345662 ZNF48Q96MX3 618 aaPredicted RBP14.14□□□□□ -0.15
SPAST-202ENST00000345662 LINC00477Q96M19 166 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 K7EN84 100 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 C9orf153Q5TBE3 101 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 IGFL4Q6B9Z1 124 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 Q8N8P6 123 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 PLA2G2EQ9NZK7 142 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 HEATR5AQ86XA9 2040 aa14.13□□□□□ -0.15
SPAST-202ENST00000345662 A0A1W2PPI3 338 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 LYNX1G3V0Z9 82 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 WISP1O95388 367 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 LYNX1P0DP58 116 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 ZNF524Q96C55 264 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 H3BMM0 161 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 UBE2WQ96B02 151 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 TRGV2A0A075B6R0 118 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 NTN3O00634 580 aaPredicted RBP14.12□□□□□ -0.15
SPAST-202ENST00000345662 CRPP02741 224 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 TAL2Q16559 108 aa14.12□□□□□ -0.15
SPAST-202ENST00000345662 MRPL51Q4U2R6 128 aaKnown RBP14.12□□□□□ -0.15
SPAST-202ENST00000345662 MYMXA0A1B0GTQ4 84 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 H3BMG7 143 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 CEND1Q8N111 149 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 TMEM86BQ8N661 226 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 SIGLEC8Q9NYZ4 499 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 TSC2P49815 1807 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 VGLL1Q99990 258 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 SRRM4A7MD48 611 aaKnown RBP14.11□□□□□ -0.15
SPAST-202ENST00000345662 LINC00158P58513 81 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 RNASE8Q8TDE3 154 aaKnown RBP14.11□□□□□ -0.15
SPAST-202ENST00000345662 ABHD17AQ96GS6 310 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 TIMM21Q9BVV7 248 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 NDUFA4L2Q9NRX3 87 aa14.11□□□□□ -0.15
SPAST-202ENST00000345662 KLF5Q13887 457 aaPredicted RBP14.1□□□□□ -0.15
SPAST-202ENST00000345662 WIPF2Q8TF74 440 aaPredicted RBP14.1□□□□□ -0.15
SPAST-202ENST00000345662 SPTBN1Q01082 2364 aaKnown RBP14.1□□□□□ -0.15
SPAST-202ENST00000345662 SLC25A16P16260 332 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 C5orf64Q2M2E5 130 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 NEGR1Q7Z3B1 354 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 WFDC12Q8WWY7 111 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 S100A7L2Q5SY68 101 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 NUPR1O60356 82 aa14.1□□□□□ -0.15
SPAST-202ENST00000345662 Q0VFX4 171 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 GATD1Q8NB37 220 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 SRSF8Q9BRL6 282 aaKnown RBP14.09□□□□□ -0.15
SPAST-202ENST00000345662 DOCK9Q9BZ29 2069 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 IGLV3-1P01715 115 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 FER1L5A0AVI2 2057 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 RSPO1Q2MKA7 263 aaPredicted RBP14.09□□□□□ -0.15
SPAST-202ENST00000345662 TDRG1Q3Y452 100 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 C2orf66Q6UXQ4 117 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 TRBV19A0A075B6N1 114 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 C8orf49Q96NF6 230 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 OVOL2Q9BRP0 275 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 VWA8A3KMH1 1905 aa14.09□□□□□ -0.15
SPAST-202ENST00000345662 IFITM1P13164 125 aa14.08□□□□□ -0.15
SPAST-202ENST00000345662 RASL10AQ92737 203 aa14.08□□□□□ -0.15
SPAST-202ENST00000345662 PI4KAP42356 2102 aa14.08□□□□□ -0.16
SPAST-202ENST00000345662 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.08□□□□□ -0.16
SPAST-202ENST00000345662 BUB1B-PAK6H3BSN5 160 aa14.08□□□□□ -0.16
SPAST-202ENST00000345662 ADARB2-AS1A8MUL3 147 aa14.08□□□□□ -0.16
SPAST-202ENST00000345662 K7ERJ3 54 aa14.08□□□□□ -0.16
SPAST-202ENST00000345662 DIDO1Q9BTC0 2240 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms