RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 RNF182Q8N6D2 247 aa15.35■□□□□ 0.05
SMARCB1-202ENST00000344921 DNAH9Q9NYC9 4486 aa15.35■□□□□ 0.05
SMARCB1-202ENST00000344921 JTBO76095 146 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 M6PRP20645 277 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 GNPNAT1Q96EK6 184 aaPredicted RBP15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 C20orf173Q96LM9 149 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 PSMG3Q9BT73 122 aaPredicted RBP15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 SLC25A2Q9BXI2 301 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 CSTL1Q9H114 145 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 KIR2DL5BA0A0G2JN68 375 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 KIR2DL5BA0A0G2JPC4 375 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 H3BQ15 152 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 IGLC2P0DOY2 106 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 DEFB1P60022 68 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 KIR2DL5AQ8N109 375 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 KCNRGQ8N5I3 272 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 KIR2DL5BQ8NHK3 375 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 ARPC5LQ9BPX5 153 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 SH3BGRL3Q9H299 93 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 TMEM14CQ9P0S9 112 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 COL7A1Q02388 2944 aa15.34■□□□□ 0.05
SMARCB1-202ENST00000344921 AGRNO00468 2067 aa15.33■□□□□ 0.05
SMARCB1-202ENST00000344921 TRAV8-2A0A0B4J237 113 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 A0A0D9SG52 128 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 A0A1W2PPV4 95 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 PYYP10082 97 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 CXCL2P19875 107 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 GUK1Q16774 197 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 EBLN2Q6P2I7 272 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 C9orf62Q8N4C0 152 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 OR10G4Q8NGN3 311 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 OR10G9Q8NGN4 311 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 OR10G7Q8NGN6 311 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 SLC50A1Q9BRV3 221 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 U3KQK5 164 aa15.33■□□□□ 0.04
SMARCB1-202ENST00000344921 UBE2CO00762 179 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 OR7C2O60412 319 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 RAB2AP61019 212 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 SERF2P84101 59 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 FOXI2Q6ZQN5 318 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 TRPT1Q86TN4 253 aaKnown RBP15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 ZNF738Q8NE65 137 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 BLNKQ8WV28 456 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 RCHY1Q96PM5 261 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 OR51M1Q9H341 326 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 RETNQ9HD89 108 aa15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 ZNF331Q9NQX6 463 aaPredicted RBP15.32■□□□□ 0.04
SMARCB1-202ENST00000344921 KANTRA0A1W2PQU2 76 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 HIST1H1EP10412 219 aaKnown RBP15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 TAS2R45P59539 299 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 GDF5OSQ5U4N7 250 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 FAM122CQ6P4D5 195 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 CCDC28AQ8IWP9 274 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 OR2G3Q8NGZ4 309 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 FAM167A-AS1Q96KT0 104 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 PAXXQ9BUH6 204 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 SAV1Q9H4B6 383 aaPredicted RBP15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 ZNF586Q9NXT0 402 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 LINC00862A6NCI5 91 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 F6UB75 175 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 SLC17A3O00476 420 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 CA1P00915 261 aaPredicted RBP15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 IGKV3-20P01619 116 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 MBP02144 154 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 HLA-DRB4P13762 266 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 HLA-DMBP28068 263 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 OR4B1Q8NGF8 309 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 CYTL1Q9NRR1 136 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 HLA-DRB4X5D2U9 266 aa15.31■□□□□ 0.04
SMARCB1-202ENST00000344921 H3BMM0 161 aa15.3■□□□□ 0.04
SMARCB1-202ENST00000344921 OR10J4P0C629 311 aa15.3■□□□□ 0.04
SMARCB1-202ENST00000344921 PSG3Q16557 428 aa15.3■□□□□ 0.04
SMARCB1-202ENST00000344921 DEFB135Q30KP9 77 aa15.3■□□□□ 0.04
SMARCB1-202ENST00000344921 KHDC3LQ587J8 217 aa15.3■□□□□ 0.04
SMARCB1-202ENST00000344921 EIF3GO75821 320 aaKnown RBP eCLIP15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 NUTF2P61970 127 aaKnown RBP15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 Q6ZWC4 215 aa15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 SAT2Q96F10 170 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 TRBV19A0A075B6N1 114 aa15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 SPP1P10451 314 aa15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 MORN3Q6PF18 240 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 RNF141Q8WVD5 230 aa15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 ZNF471Q9BX82 626 aaPredicted RBP15.29■□□□□ 0.04
SMARCB1-202ENST00000344921 A0A0J9YX75 114 aa15.28■□□□□ 0.04
SMARCB1-202ENST00000344921 BCL2L11O43521 198 aa15.28■□□□□ 0.04
SMARCB1-202ENST00000344921 NBEAP1P0C6P0 100 aa15.28■□□□□ 0.04
SMARCB1-202ENST00000344921 CDC34P49427 236 aaPredicted RBP15.28■□□□□ 0.04
SMARCB1-202ENST00000344921 TMUB2Q71RG4 321 aa15.28■□□□□ 0.04
SMARCB1-202ENST00000344921 NBEAL2Q6ZNJ1 2754 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 HMGB3O15347 200 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 PRB4P10163 310 aaPredicted RBP15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 UBE2L3P68036 154 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 PSG9Q00887 426 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 PDE6HQ13956 83 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 TMEM41BQ5BJD5 291 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 RPP25LQ8N5L8 163 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 SUN5Q8TC36 379 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 RPUSD4Q96CM3 377 aaKnown RBP15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 CLEC5AQ9NY25 188 aa15.27■□□□□ 0.04
SMARCB1-202ENST00000344921 SPRY2O43597 315 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms