RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 HBE1P02100 147 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 RPL29P47914 159 aaKnown RBP14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PRR20EP86478 221 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PRR20CP86479 221 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PRR20DP86480 221 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PRR20BP86481 221 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PRR20AP86496 221 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 CYCSP99999 105 aaKnown RBP14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 OXA1LQ15070 435 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PSG3Q16557 428 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 C10orf113Q5VZT2 155 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 TMEM252Q8N6L7 170 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 ZNF738Q8NE65 137 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 OR1L4Q8NGR5 311 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 FAM210BQ96KR6 192 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 PFDN5Q99471 154 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 APLNQ9ULZ1 77 aa14.38□□□□□ -0.11
CEACAM3-201ENST00000344550 FAM24AA6NFZ4 105 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 FXYD7P58549 80 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 S100A10P60903 97 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 RAB32Q13637 225 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 GUK1Q16774 197 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 RRN3P1Q2M238 152 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 C1orf158Q8N1D5 194 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 OR11H7Q8NGC8 314 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 TMEM37Q8WXS4 190 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 CELA1Q9UNI1 258 aa14.37□□□□□ -0.11
CEACAM3-201ENST00000344550 HYDINQ4G0P3 5121 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 DEFB131BA0A096LNP1 70 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 RLN2P04090 185 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 RNF182Q8N6D2 247 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 OR8A1Q8NGG7 326 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 NMES1Q9C002 83 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 ZNF331Q9NQX6 463 aaPredicted RBP14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 BATF3Q9NR55 127 aa14.36□□□□□ -0.11
CEACAM3-201ENST00000344550 IGHV3OR16-12A0A075B7B8 117 aa14.35□□□□□ -0.11
CEACAM3-201ENST00000344550 INSP01308 110 aa14.35□□□□□ -0.11
CEACAM3-201ENST00000344550 DKK2Q9UBU2 259 aa14.35□□□□□ -0.11
CEACAM3-201ENST00000344550 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
CEACAM3-201ENST00000344550 IGHV4-4A0A075B6R2 117 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 TSPOP30536 169 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 DEFA1P59665 94 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 DEFA3P59666 94 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 TMEM256Q8N2U0 113 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 MARVELD1Q9BSK0 173 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 TMEM208Q9BTX3 173 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 SLC25A31Q9H0C2 315 aa14.34□□□□□ -0.11
CEACAM3-201ENST00000344550 LOC102723971A0A1B0GUV8 181 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 IGSF23A1L1A6 192 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 E5RGE8 158 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 INMT-MINDY4F8WBC2 141 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 ZNF253O75346 499 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 OPCMLQ14982 345 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 IGFL4Q6B9Z1 124 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 RPUSD4Q96CM3 377 aaKnown RBP14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 NIPSNAP3BQ9BS92 247 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 SLC39A9Q9NUM3 307 aa14.33□□□□□ -0.12
CEACAM3-201ENST00000344550 CRXO43186 299 aaPredicted RBP14.32□□□□□ -0.12
CEACAM3-201ENST00000344550 NDUFAF3Q9BU61 184 aa14.32□□□□□ -0.12
CEACAM3-201ENST00000344550 PPP1R14DQ9NXH3 145 aa14.32□□□□□ -0.12
CEACAM3-201ENST00000344550 EMP1P54849 157 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 IFITM3Q01628 133 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 HIST1H1AQ02539 215 aaPredicted RBP14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 BAXQ07812 192 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 SPINK13Q1W4C9 94 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 FAM222AQ5U5X8 452 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 MIC13Q5XKP0 118 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 SAT2Q96F10 170 aaPredicted RBP14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 C20orf144Q9BQM9 153 aa14.31□□□□□ -0.12
CEACAM3-201ENST00000344550 UBE2L5PA0A1B0GUS4 154 aa14.3□□□□□ -0.12
CEACAM3-201ENST00000344550 RHOBP62745 196 aa14.3□□□□□ -0.12
CEACAM3-201ENST00000344550 KCNIP2Q9NS61 270 aa14.3□□□□□ -0.12
CEACAM3-201ENST00000344550 TMEM14CQ9P0S9 112 aa14.3□□□□□ -0.12
CEACAM3-201ENST00000344550 YTHDF2Q9Y5A9 579 aaKnown RBP14.3□□□□□ -0.12
CEACAM3-201ENST00000344550 LYRM9A8MSI8 78 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 M0R2Z0 102 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 P0DMU3 169 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 FAM231AP0DMU4 169 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 FAM231CP0DMU5 169 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 CDKN1BP46527 198 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 RPP25LQ8N5L8 163 aaKnown RBP14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 OR10J6PQ8NGY7 276 aa14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 MRPL53Q96EL3 112 aaKnown RBP14.29□□□□□ -0.12
CEACAM3-201ENST00000344550 PET100P0DJ07 73 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 FGF7P21781 194 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 TAS2R60P59551 318 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 PDE6HQ13956 83 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 MORN5Q5VZ52 161 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 ODF3Q96PU9 254 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 NPCDR1Q9BY65 106 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 KMT2AQ03164 3969 aa14.28□□□□□ -0.12
CEACAM3-201ENST00000344550 H3BQ15 152 aa14.27□□□□□ -0.13
CEACAM3-201ENST00000344550 ZNF493Q6ZR52 646 aa14.27□□□□□ -0.13
CEACAM3-201ENST00000344550 ZNF767PQ75MW2 155 aa14.27□□□□□ -0.13
CEACAM3-201ENST00000344550 OR5C1Q8NGR4 320 aa14.27□□□□□ -0.13
CEACAM3-201ENST00000344550 PRELID1Q9Y255 219 aa14.27□□□□□ -0.13
CEACAM3-201ENST00000344550 HIST1H1EP10412 219 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms