RNA–Protein interactions for RNA: ENST00000344063.6

RPL28-201, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 4,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-201ENST00000344063 SLC25A39Q9BZJ4 359 aaPredicted RBP8.82□□□□□ -1
RPL28-201ENST00000344063 DPM2O94777 84 aa8.82□□□□□ -1
RPL28-201ENST00000344063 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
RPL28-201ENST00000344063 ETDBQ3ZM63 59 aa8.82□□□□□ -1
RPL28-201ENST00000344063 LYZL1Q6UWQ5 148 aa8.82□□□□□ -1
RPL28-201ENST00000344063 Q6ZS92 163 aa8.82□□□□□ -1
RPL28-201ENST00000344063 PPBPP02775 128 aa8.81□□□□□ -1
RPL28-201ENST00000344063 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
RPL28-201ENST00000344063 ZNF329Q86UD4 541 aa8.81□□□□□ -1
RPL28-201ENST00000344063 TMEM238C9JI98 176 aa8.81□□□□□ -1
RPL28-201ENST00000344063 IGKCP01834 107 aa8.81□□□□□ -1
RPL28-201ENST00000344063 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
RPL28-201ENST00000344063 TTC28Q96AY4 2481 aa8.81□□□□□ -1
RPL28-201ENST00000344063 IGHV1-3A0A0C4DH29 117 aa8.81□□□□□ -1
RPL28-201ENST00000344063 FAM74A4Q5TZK3 123 aa8.81□□□□□ -1
RPL28-201ENST00000344063 PCNX2A6NKB5 2137 aa8.81□□□□□ -1
RPL28-201ENST00000344063 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
RPL28-201ENST00000344063 POU2AF1Q16633 256 aa8.81□□□□□ -1
RPL28-201ENST00000344063 C17orf58Q2M2W7 97 aa8.81□□□□□ -1
RPL28-201ENST00000344063 ZC2HC1BQ5TFG8 222 aa8.81□□□□□ -1
RPL28-201ENST00000344063 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.81□□□□□ -19e-9■■■■□ 21.8
RPL28-201ENST00000344063 SLC50A1Q9BRV3 221 aa8.81□□□□□ -1
RPL28-201ENST00000344063 C11orf1Q9H5F2 150 aa8.81□□□□□ -1
RPL28-201ENST00000344063 SMAD7O15105 426 aaKnown RBP8.8□□□□□ -1
RPL28-201ENST00000344063 TOMM40O96008 361 aa8.8□□□□□ -1
RPL28-201ENST00000344063 CYSLTR1Q9Y271 337 aa8.8□□□□□ -1
RPL28-201ENST00000344063 NDUFA4L2Q9NRX3 87 aa8.8□□□□□ -1
RPL28-201ENST00000344063 SIGLEC9Q9Y336 463 aa8.8□□□□□ -1
RPL28-201ENST00000344063 COL6A6A6NMZ7 2263 aa8.8□□□□□ -1
RPL28-201ENST00000344063 IGKV2-40A0A087WW87 121 aaPredicted RBP8.8□□□□□ -1
RPL28-201ENST00000344063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.8□□□□□ -1
RPL28-201ENST00000344063 IGKV2D-40P01614 121 aaPredicted RBP8.8□□□□□ -1
RPL28-201ENST00000344063 Q8TCH9 128 aa8.8□□□□□ -1
RPL28-201ENST00000344063 TNCP24821 2201 aa8.8□□□□□ -1
RPL28-201ENST00000344063 LYNX1G3V0Z9 82 aa8.8□□□□□ -1
RPL28-201ENST00000344063 LYNX1P0DP58 116 aa8.8□□□□□ -1
RPL28-201ENST00000344063 ATP5J2P56134 94 aa8.8□□□□□ -1
RPL28-201ENST00000344063 SRSF6Q13247 344 aaKnown RBP8.8□□□□□ -1
RPL28-201ENST00000344063 ODF3L1Q8IXM7 274 aa8.8□□□□□ -1
RPL28-201ENST00000344063 Q8TAT8 98 aa8.8□□□□□ -1
RPL28-201ENST00000344063 CITED2Q99967 270 aaPredicted RBP8.8□□□□□ -1
RPL28-201ENST00000344063 ZGRF1Q86YA3 2104 aa8.79□□□□□ -1
RPL28-201ENST00000344063 IGFL4Q6B9Z1 124 aa8.79□□□□□ -1
RPL28-201ENST00000344063 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
RPL28-201ENST00000344063 RPRMLQ8N4K4 120 aa8.79□□□□□ -1
RPL28-201ENST00000344063 NXT2Q9NPJ8 142 aaKnown RBP8.79□□□□□ -1
RPL28-201ENST00000344063 C9orf118A6NHY6 69 aa8.79□□□□□ -1
RPL28-201ENST00000344063 SYT8Q8NBV8 401 aa8.79□□□□□ -1
RPL28-201ENST00000344063 VCX2Q9H322 139 aa8.79□□□□□ -1
RPL28-201ENST00000344063 A0A1W2PPI3 338 aa8.79□□□□□ -1
RPL28-201ENST00000344063 TMEM213A2RRL7 107 aa8.79□□□□□ -1
RPL28-201ENST00000344063 K7ERJ3 54 aa8.79□□□□□ -1
RPL28-201ENST00000344063 HOXA3O43365 443 aaPredicted RBP8.79□□□□□ -1
RPL28-201ENST00000344063 PPP1R17O96001 155 aa8.79□□□□□ -1
RPL28-201ENST00000344063 ZNF134P52741 427 aa8.79□□□□□ -1
RPL28-201ENST00000344063 PRR20EP86478 221 aa8.79□□□□□ -1
RPL28-201ENST00000344063 PRR20CP86479 221 aa8.79□□□□□ -1
RPL28-201ENST00000344063 PRR20DP86480 221 aa8.79□□□□□ -1
RPL28-201ENST00000344063 PRR20BP86481 221 aa8.79□□□□□ -1
RPL28-201ENST00000344063 PRR20AP86496 221 aa8.79□□□□□ -1
RPL28-201ENST00000344063 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
RPL28-201ENST00000344063 C11orf53Q8IXP5 236 aa8.79□□□□□ -1
RPL28-201ENST00000344063 SMIM27A0A1W2PRY6 76 aa8.78□□□□□ -1
RPL28-201ENST00000344063 MMP23AO75900 390 aa8.78□□□□□ -1
RPL28-201ENST00000344063 GAGE2BQ13066 116 aa8.78□□□□□ -1
RPL28-201ENST00000344063 FAM106AQ4KMX7 169 aa8.78□□□□□ -1
RPL28-201ENST00000344063 GAGE2EQ4V326 116 aa8.78□□□□□ -1
RPL28-201ENST00000344063 GAGE2DQ9UEU5 116 aa8.78□□□□□ -1
RPL28-201ENST00000344063 DNAL4O96015 105 aa8.78□□□□□ -1
RPL28-201ENST00000344063 PRTN3P24158 256 aa8.78□□□□□ -1
RPL28-201ENST00000344063 MED13Q9UHV7 2174 aa8.78□□□□□ -1
RPL28-201ENST00000344063 IGLV3-9A0A075B6K5 115 aa8.78□□□□□ -1
RPL28-201ENST00000344063 CT83Q5H943 113 aa8.78□□□□□ -1
RPL28-201ENST00000344063 CRIP3Q6Q6R5 217 aa8.78□□□□□ -1
RPL28-201ENST00000344063 ZNF833PQ6ZTB9 187 aa8.78□□□□□ -1
RPL28-201ENST00000344063 CHAC1Q9BUX1 264 aa8.78□□□□□ -1
RPL28-201ENST00000344063 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
RPL28-201ENST00000344063 TRGV3P03979 118 aa8.78□□□□□ -1
RPL28-201ENST00000344063 AZU1P20160 251 aa8.78□□□□□ -1
RPL28-201ENST00000344063 ZNF672Q499Z4 452 aaPredicted RBP8.78□□□□□ -1
RPL28-201ENST00000344063 KLF17Q5JT82 389 aaPredicted RBP8.78□□□□□ -1
RPL28-201ENST00000344063 AMTNQ6UX39 209 aa8.78□□□□□ -1
RPL28-201ENST00000344063 ZNF492Q9P255 531 aa8.78□□□□□ -1
RPL28-201ENST00000344063 A0A0G2JNJ9 132 aa8.77□□□□□ -1
RPL28-201ENST00000344063 ZNF815PA8K554 130 aa8.77□□□□□ -1
RPL28-201ENST00000344063 CD300EQ496F6 205 aaPredicted RBP8.77□□□□□ -1
RPL28-201ENST00000344063 SRSF8Q9BRL6 282 aaKnown RBP8.77□□□□□ -1
RPL28-201ENST00000344063 PIMREGQ9BSJ6 248 aa8.77□□□□□ -1
RPL28-201ENST00000344063 Q9UFV3 132 aa8.77□□□□□ -1
RPL28-201ENST00000344063 H3BRM9 83 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 BUB1B-PAK6H3BSN5 160 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 COX8AP10176 69 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 C1orf122Q6ZSJ8 110 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 KIR2DL4Q99706 377 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 CSTL1Q9H114 145 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 SPINK8P0C7L1 97 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 ASIPP42127 132 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 LYPD2Q6UXB3 125 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 CLEC19AQ6UXS0 136 aa8.77□□□□□ -1.01
RPL28-201ENST00000344063 Q6ZPA2 131 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms