RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 UBE2G2P60604 165 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 MDFIQ99750 246 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 MANBALQ9NQG1 85 aa6.23□□□□□ -1.41
HMGCR-202ENST00000343975 IGKV1D-37A0A075B6S9 117 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 ISLRO14498 428 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 DUSP14O95147 198 aaKnown RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 ZNF688P0C7X2 276 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 ARL14EPLP0DKL9 152 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 FHL3Q13643 280 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 STHQ8IWL8 128 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 BUB3O43684 328 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 GCHFRP30047 84 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 FGF8P55075 233 aaPredicted RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 KRTAP21-3Q3LHN1 58 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 CD300EQ496F6 205 aaPredicted RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 GCSAMLQ5JQS6 135 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 PSMG4Q5JS54 123 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 OR4B1Q8NGF8 309 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 TMEM208Q9BTX3 173 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 ZFAND3Q9H8U3 227 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 APOC3P02656 99 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 SNRPCP09234 159 aaKnown RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 TSPOP30536 169 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 AKR1C3P42330 323 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 CNN1P51911 297 aaKnown RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 CD81P60033 236 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 PDE6HQ13956 83 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 DEFB121Q5J5C9 76 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 CYTL1Q9NRR1 136 aa6.22□□□□□ -1.41
HMGCR-202ENST00000343975 ZNF256Q9Y2P7 627 aaPredicted RBP6.22□□□□□ -1.41
HMGCR-202ENST00000343975 GATCO43716 136 aaKnown RBP6.21□□□□□ -1.41
HMGCR-202ENST00000343975 CT45A10P0DMU9 189 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 PEA15Q15121 130 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 TMEM61Q8N0U2 210 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 TXNDC17Q9BRA2 123 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 SEPSECSQ9HD40 501 aaKnown RBP6.21□□□□□ -1.41
HMGCR-202ENST00000343975 TREM1Q9NP99 234 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 SIGLEC8Q9NYZ4 499 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 SELENOKQ9Y6D0 94 aa6.21□□□□□ -1.41
HMGCR-202ENST00000343975 PGPA6NDG6 321 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 G3V3Q6 166 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 H3BTX0 84 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 DEFB114Q30KQ6 69 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 CSN3P07498 182 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 STAG3L2P0CL84 134 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 STAG3L3P0CL85 134 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 DEFB131AP59861 70 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 ICAM4Q14773 271 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 WIPF2Q8TF74 440 aaPredicted RBP6.21□□□□□ -1.42
HMGCR-202ENST00000343975 PCNPQ8WW12 178 aaKnown RBP6.21□□□□□ -1.42
HMGCR-202ENST00000343975 TMEM37Q8WXS4 190 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 STAB1Q9NY15 2570 aa6.21□□□□□ -1.42
HMGCR-202ENST00000343975 TRAV5A0A0B4J249 113 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 F8W735 103 aaPredicted RBP6.2□□□□□ -1.42
HMGCR-202ENST00000343975 PYYP10082 97 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 SUMO1P63165 101 aaKnown RBP6.2□□□□□ -1.42
HMGCR-202ENST00000343975 HIST1H1AQ02539 215 aaPredicted RBP6.2□□□□□ -1.42
HMGCR-202ENST00000343975 VSIRQ9H7M9 311 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 KRTAP10-3P60369 221 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 LYPD1Q8N2G4 141 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 RPP25LQ8N5L8 163 aaKnown RBP6.2□□□□□ -1.42
HMGCR-202ENST00000343975 RPUSD4Q96CM3 377 aaKnown RBP6.2□□□□□ -1.42
HMGCR-202ENST00000343975 MS4A6AQ9H2W1 248 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 SORL1Q92673 2214 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 HAGHQ16775 308 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 C5orf17Q8NAS9 161 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 OTORQ9NRC9 128 aa6.2□□□□□ -1.42
HMGCR-202ENST00000343975 SERTM2A0A1B0GWG4 89 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 RAB19A4D1S5 217 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 SNAPINO95295 136 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 SPATA31B1PQ5VZV4 182 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 MED9Q9NWA0 146 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 TRAV2A0A0B4J234 112 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 FBLL1A6NHQ2 334 aaKnown RBP6.19□□□□□ -1.42
HMGCR-202ENST00000343975 PAGE4O60829 102 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 PSG3Q16557 428 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 WFDC9Q8NEX5 89 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 GLMPQ8WWB7 406 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 DAZAP1Q96EP5 407 aaKnown RBP6.19□□□□□ -1.42
HMGCR-202ENST00000343975 C1QTNF4Q9BXJ3 329 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 Q9H3A6 140 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 A0A1W2PRE2 83 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 C11orf94C9JXX5 98 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 IGLV1-51P01701 117 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 S100A8P05109 93 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 OXLD1Q5BKU9 147 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
HMGCR-202ENST00000343975 NIPBLQ6KC79 2804 aaeCLIP6.18□□□□□ -1.42
HMGCR-202ENST00000343975 ADARB2-AS1A8MUL3 147 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 S100PP25815 95 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 PATE2Q6UY27 113 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 VAX2Q9UIW0 290 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 SMAD5-AS1Q9Y6J3 95 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 ZNF253O75346 499 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 EIF3GO75821 320 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGCR-202ENST00000343975 APOC4P55056 127 aa6.18□□□□□ -1.42
HMGCR-202ENST00000343975 MBD3L1Q8WWY6 194 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms