RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ADAMTSL3P82987 1691 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 PMS2P5A8MQ11 134 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 FAM104BQ5XKR9 115 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 HIST3H2BBQ8N257 126 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 NUP35Q8NFH5 326 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 ZNF501Q96CX3 271 aaPredicted RBP14.58□□□□□ -0.08
SMAD4-201ENST00000342988 E9PQ18 207 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 IGKV1D-16P01601 117 aa14.58□□□□□ -0.08
SMAD4-201ENST00000342988 SPATA31B1PQ5VZV4 182 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 LINC01465Q8N7H1 131 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 ATOX1O00244 68 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 RNASE6Q93091 150 aaKnown RBP14.57□□□□□ -0.08
SMAD4-201ENST00000342988 MORN5Q5VZ52 161 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 LCN12Q6JVE5 192 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 CRIM1Q9NZV1 1036 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 LOC105371267A0A1B0GV96 52 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 MORN2Q502X0 79 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 PRO1854Q9UHT4 67 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 LINC01545Q5VT33 79 aa14.57□□□□□ -0.08
SMAD4-201ENST00000342988 A0A0G2JK05 382 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 PRR15LQ9BU68 103 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 SRXN1Q9BYN0 137 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 TRBV24-1A0A075B6N3 115 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 LYZL1Q6UWQ5 148 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 F5H768 121 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 PYYP10082 97 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 PFN2P35080 140 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 MINOS1Q5TGZ0 78 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 MINOS1-NBL1R4GNA1 71 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 FNDC1Q4ZHG4 1894 aaPredicted RBP14.56□□□□□ -0.08
SMAD4-201ENST00000342988 FAM181AQ8N9Y4 354 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 ZMAT4Q9H898 229 aa14.56□□□□□ -0.08
SMAD4-201ENST00000342988 IGHV2OR16-5A0A0B4J2B6 119 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 CCL3L1P16619 93 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 TBX6O95947 436 aaPredicted RBP14.55□□□□□ -0.08
SMAD4-201ENST00000342988 C14orf178Q8N769 122 aaPredicted RBP14.55□□□□□ -0.08
SMAD4-201ENST00000342988 SPSB2Q99619 263 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 CRYBA2P53672 197 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 CRYBA4P53673 196 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 NAA38Q9BRA0 125 aaKnown RBP14.55□□□□□ -0.08
SMAD4-201ENST00000342988 ZC2HC1BQ5TFG8 222 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 RFNGQ9Y644 331 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 IGHV1-24A0A0C4DH33 117 aa14.55□□□□□ -0.08
SMAD4-201ENST00000342988 SH2D1AO60880 128 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 KLHL30-AS1Q8NEE0 82 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 ZNF319Q9P2F9 582 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 CECR9P0C854 216 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 C1QTNF5Q9BXJ0 243 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 GAGE12HA6NDE8 117 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 IGHV3-53P01767 116 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 DMRTC2Q8IXT2 367 aaPredicted RBP14.54□□□□□ -0.08
SMAD4-201ENST00000342988 LY96Q9Y6Y9 160 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 TAX1BP3O14907 124 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 RPL15P61313 204 aaKnown RBP14.54□□□□□ -0.08
SMAD4-201ENST00000342988 C3orf56Q8N813 242 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 AGMATQ9BSE5 352 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 VWC2Q2TAL6 325 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 HERVK_113P63121 156 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 MUSTN1Q8IVN3 82 aa14.54□□□□□ -0.08
SMAD4-201ENST00000342988 TMEM52Q8NDY8 209 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 EXOC3-AS1Q8N2X6 119 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 ADAMTS9Q9P2N4 1935 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 CARD19Q96LW7 228 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 LINC00271P0C7V0 271 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 RNASE2P10153 161 aaKnown RBP14.53□□□□□ -0.08
SMAD4-201ENST00000342988 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.53□□□□□ -0.08
SMAD4-201ENST00000342988 COX6A1P12074 109 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 CFHR4Q92496 578 aa14.53□□□□□ -0.08
SMAD4-201ENST00000342988 RTBDNQ9BSG5 229 aaPredicted RBP14.53□□□□□ -0.08
SMAD4-201ENST00000342988 A0A1B0GW64 132 aa14.52□□□□□ -0.08
SMAD4-201ENST00000342988 MRPL14Q6P1L8 145 aaKnown RBP14.52□□□□□ -0.08
SMAD4-201ENST00000342988 WFDC12Q8WWY7 111 aa14.52□□□□□ -0.08
SMAD4-201ENST00000342988 ZSWIM8A7E2V4 1837 aa14.52□□□□□ -0.08
SMAD4-201ENST00000342988 LINC01551Q86U37 167 aa14.52□□□□□ -0.08
SMAD4-201ENST00000342988 TRAV40A0A0B4J280 105 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 NOTCH4Q99466 2003 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 OOSP1A8MZH6 123 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 MESP1Q9BRJ9 268 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 FOXS1O43638 330 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 DEFB130BP0DP73 79 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 DEFB130AP0DP74 79 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 SRSF8Q9BRL6 282 aaKnown RBP14.52□□□□□ -0.09
SMAD4-201ENST00000342988 PCNX3Q9H6A9 2034 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 CFPP27918 469 aa14.52□□□□□ -0.09
SMAD4-201ENST00000342988 TSSC4Q9Y5U2 329 aaPredicted RBP14.52□□□□□ -0.09
SMAD4-201ENST00000342988 TRAV1-1A0A0B4J248 108 aa14.51□□□□□ -0.09
SMAD4-201ENST00000342988 IGFBPL1Q8WX77 278 aa14.51□□□□□ -0.09
SMAD4-201ENST00000342988 A0A1W2PR77 199 aa14.51□□□□□ -0.09
SMAD4-201ENST00000342988 THBDP07204 575 aa14.51□□□□□ -0.09
SMAD4-201ENST00000342988 CEND1Q8N111 149 aa14.51□□□□□ -0.09
SMAD4-201ENST00000342988 ADAMTSL1Q8N6G6 1762 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 PRSS29PA6NIE9 313 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 CELA3AP09093 270 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 TMEM75Q8N9X5 138 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 KLHDC3Q9BQ90 382 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 DEPPQ9NTK1 212 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 TRBV6-7A0A0A0MS04 114 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 PTPRBP23467 1997 aa14.5□□□□□ -0.09
SMAD4-201ENST00000342988 FBLIM1Q8WUP2 373 aa14.49□□□□□ -0.09
SMAD4-201ENST00000342988 TP53TG1Q9Y2A0 90 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms