RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 APOHP02749 345 aaPredicted RBP9.49□□□□□ -0.89
RTN3-203ENST00000341307 SRD5A1P18405 259 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 ERVK11-1P61568 191 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 PRR30Q53SZ7 412 aaPredicted RBP9.49□□□□□ -0.89
RTN3-203ENST00000341307 CFAP126Q5VTH2 177 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 CARD19Q96LW7 228 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 TRBV20-1A0A075B6N2 111 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 IQCF6A8MYZ5 107 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 RHODO00212 210 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 WNT9BO14905 357 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 SLC25A5P05141 298 aaKnown RBP9.49□□□□□ -0.89
RTN3-203ENST00000341307 H2BFWTQ7Z2G1 175 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 CEND1Q8N111 149 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 PKIBQ9C010 78 aa9.49□□□□□ -0.89
RTN3-203ENST00000341307 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
RTN3-203ENST00000341307 CENPVL3A0A0U1RRI6 287 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 FAM106CPP0CH98 169 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PRR20EP86478 221 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PRR20CP86479 221 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PRR20DP86480 221 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PRR20BP86481 221 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PRR20AP86496 221 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 EIF4EBP1Q13541 118 aaPredicted RBP9.48□□□□□ -0.89
RTN3-203ENST00000341307 FAM106AQ4KMX7 169 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 C22orf34Q6ZV56 151 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 C1orf162Q8NEQ5 155 aaPredicted RBP9.48□□□□□ -0.89
RTN3-203ENST00000341307 TCF19Q9Y242 345 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
RTN3-203ENST00000341307 IGKV2D-26A0A0A0MRZ7 120 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 TIMM8AO60220 97 aaPredicted RBP9.48□□□□□ -0.89
RTN3-203ENST00000341307 SCGB2A1O75556 95 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 OR2H2O95918 312 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 CSN1S1P47710 185 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 MSMPQ1L6U9 139 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 C5orf47Q569G3 176 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 Q6P435 159 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 AJUBAQ96IF1 538 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 PLEKHA3Q9HB20 300 aa9.48□□□□□ -0.89
RTN3-203ENST00000341307 FLNCQ14315 2725 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 IGLV1-44P01699 117 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 LOXL1Q08397 574 aaPredicted RBP9.47□□□□□ -0.89
RTN3-203ENST00000341307 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 SLC25A15Q9Y619 301 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 M0R1B8 84 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 RRN3P1Q2M238 152 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 C12orf74Q32Q52 190 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
RTN3-203ENST00000341307 HEATR1Q9H583 2144 aaKnown RBP9.47□□□□□ -0.89
RTN3-203ENST00000341307 DYSFO75923 2080 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 LINC01548A6NM66 108 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 IGHG4P01861 327 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 LINC00205P59089 165 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 FAM27E3Q08E93 113 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.89
RTN3-203ENST00000341307 FAM169BQ8N8A8 192 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 Q8NA96 180 aa9.46□□□□□ -0.89
RTN3-203ENST00000341307 FAM53AQ6NSI3 398 aaPredicted RBP9.46□□□□□ -0.9
RTN3-203ENST00000341307 LINC00322Q6ZN03 302 aaPredicted RBP9.46□□□□□ -0.9
RTN3-203ENST00000341307 C8orf46Q8TAG6 207 aa9.46□□□□□ -0.9
RTN3-203ENST00000341307 PTH2Q96A98 100 aa9.46□□□□□ -0.9
RTN3-203ENST00000341307 UTP20O75691 2785 aaKnown RBP9.45□□□□□ -0.9
RTN3-203ENST00000341307 ADGRG4Q8IZF6 3080 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 PSPNO60542 156 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 ADIPOQQ15848 244 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 LINC00596Q86U02 117 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 FAM57AQ8TBR7 257 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 SOX21Q9Y651 276 aaPredicted RBP9.45□□□□□ -0.9
RTN3-203ENST00000341307 TENM4Q6N022 2769 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 TRBV25-1A0A075B6N4 114 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 SPRNQ5BIV9 151 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 FAM159AQ6UWV7 190 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 HSD17B10Q99714 261 aaKnown RBP9.45□□□□□ -0.9
RTN3-203ENST00000341307 NABP2Q9BQ15 211 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 CADP27708 2225 aa9.45□□□□□ -0.9
RTN3-203ENST00000341307 AGRNO00468 2067 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 OR5AN1Q8NGI8 311 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 PPP1R35Q8TAP8 253 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 NRGNQ92686 78 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
RTN3-203ENST00000341307 AMMECR1Q9Y4X0 333 aaPredicted RBP9.44□□□□□ -0.9
RTN3-203ENST00000341307 PPDPFLQ8WWR9 84 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 DKK2Q9UBU2 259 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 METRNQ9UJH8 293 aa9.44□□□□□ -0.9
RTN3-203ENST00000341307 MBNL2Q5VZF2 373 aaKnown RBP9.43□□□□□ -0.9
RTN3-203ENST00000341307 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 PIFOQ8TCI5 191 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 ZNF414Q96IQ9 312 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 PRSS22Q9GZN4 317 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 FASNP49327 2511 aaKnown RBP9.43□□□□□ -0.9
RTN3-203ENST00000341307 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 TRAV25A0A0B4J276 109 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 A4D1N5 150 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 LINC00473A8K010 186 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 ZNF497Q6ZNH5 498 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 Q8IYB0 196 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 CXXC4Q9H2H0 198 aa9.43□□□□□ -0.9
RTN3-203ENST00000341307 GCN1Q92616 2671 aaKnown RBP9.42□□□□□ -0.9
RTN3-203ENST00000341307 A0A0G2JNJ9 132 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 428.7 ms