RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RAB11BQ15907 218 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 ATRAIDQ6UW56 229 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 ZNF818PQ6ZRF7 136 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 OR52I1Q8NGK6 324 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 TSC22D3Q99576 134 aa6.61□□□□□ -1.35
ATXN3-201ENST00000340660 ELF5Q9UKW6 265 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-201ENST00000340660 A0A075B6Q4 140 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 FLOT2Q14254 428 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 C4orf46Q504U0 113 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 HACD4Q5VWC8 232 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 Q6ZRP5 223 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 TRIM63Q969Q1 353 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 CIB1Q99828 191 aa6.6□□□□□ -1.35
ATXN3-201ENST00000340660 INS-IGF2F8WCM5 200 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-201ENST00000340660 F2RP25116 425 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 DEFB107AQ8IZN7 70 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 ARRDC1Q8N5I2 433 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 INO80EQ8NBZ0 244 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-201ENST00000340660 OR4A16Q8NH70 328 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 TRUB1Q8WWH5 349 aaKnown RBP6.59□□□□□ -1.35
ATXN3-201ENST00000340660 LINC00479Q96M42 142 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 AMBNQ9NP70 447 aa6.59□□□□□ -1.35
ATXN3-201ENST00000340660 HRH1P35367 487 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 TALDO1P37837 337 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 GALR1P47211 349 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 ETV1P50549 477 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 SUB1P53999 127 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-201ENST00000340660 RAB32Q13637 225 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 TMEM183BQ1AE95 376 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 HSD17B12Q53GQ0 312 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 FAM162BQ5T6X4 162 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 MEDAGQ5VYS4 303 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 CNIH2Q6PI25 160 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 CCDC190Q86UF4 302 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 TMEM183AQ8IXX5 376 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 OR5H2Q8NGV7 314 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 NPIPB3Q92617 1050 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 C2orf50Q96LR7 162 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 SLC5A7Q9GZV3 580 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 DAPK2Q9UIK4 370 aa6.58□□□□□ -1.36
ATXN3-201ENST00000340660 IGLV1-50A0A075B6I6 118 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 HIST1H1DP16402 221 aaKnown RBP6.57□□□□□ -1.36
ATXN3-201ENST00000340660 DTYMKP23919 212 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 PRDX6P30041 224 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-201ENST00000340660 VWC2Q2TAL6 325 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 ASB16-AS1Q495Z4 193 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 SLC35G3Q8N808 338 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 OR10G4Q8NGN3 311 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 GABARAPL3Q9BY60 117 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 FGF20Q9NP95 211 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-201ENST00000340660 URGCP-MRPS24S4R325 110 aa6.57□□□□□ -1.36
ATXN3-201ENST00000340660 IGHV3-64A0A075B6Q5 118 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 IGKV2D-30A0A075B6S6 120 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 IGHV1OR15-1A0A075B7D0 117 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 RLN1P04808 185 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 PFN1P07737 140 aaKnown RBP6.56□□□□□ -1.36
ATXN3-201ENST00000340660 PTHLHP12272 177 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 CCR6P51684 374 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 OR10A3P58181 314 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 LYZP61626 148 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 BSXQ3C1V8 233 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 NOXA1Q86UR1 476 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 ZNF431Q8TF32 576 aaPredicted RBP6.56□□□□□ -1.36
ATXN3-201ENST00000340660 KLK12Q9UKR0 248 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 TP53TG3Q9ULZ0 132 aa6.56□□□□□ -1.36
ATXN3-201ENST00000340660 LINC00854A0A1B0GVQ3 168 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 PPYP01298 95 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 SLC25A4P12235 298 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 CXCL3P19876 107 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 FCGR2CP31995 323 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 IZUMO4Q1ZYL8 232 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 Q6ZQT7 251 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 EIF4E3Q8N5X7 224 aaKnown RBP6.55□□□□□ -1.36
ATXN3-201ENST00000340660 TMEM75Q8N9X5 138 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 OR10R2Q8NGX6 335 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 SEC22AQ96IW7 307 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 GFI1Q99684 422 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 GTSF1LQ9H1H1 148 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 SLC25A22Q9H936 323 aa6.55□□□□□ -1.36
ATXN3-201ENST00000340660 FKBP6O75344 327 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 WNT4P56705 351 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 FXYD4P59646 89 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 ZNF90Q03938 601 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 MAJINQ3KP22 176 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 IDNKQ5T6J7 187 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 STPG4Q8N801 248 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 TSPAN14Q8NG11 270 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 OR10P1Q8NGE3 313 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 SLC25A38Q96DW6 304 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 ACY3Q96HD9 319 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 RETNLBQ9BQ08 111 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 MGAT4CQ9UBM8 478 aa6.54□□□□□ -1.36
ATXN3-201ENST00000340660 TMEM272A0A1B0GTI8 110 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 SNTNA6NMZ2 147 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 SLC17A2O00624 439 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 HLA-DQA1P01909 254 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms