RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SMIM17P0DL12 118 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 ATP5J2P56134 94 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 H3BRM9 83 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 LEPROTL1O95214 131 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 ZNF138P52744 262 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 MIR17HGQ75NE6 70 aa12.05□□□□□ -0.48
BRAT1-201ENST00000340611 A0A1W2PPM0 123 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 A6NDN8 102 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 SEC11AP67812 179 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 C5orf64Q2M2E5 130 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 HSD17B10Q99714 261 aaKnown RBP12.04□□□□□ -0.48
BRAT1-201ENST00000340611 TLN2Q9Y4G6 2542 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■■□□ 17.2
BRAT1-201ENST00000340611 PRSS46E5RG02 174 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 DUTP33316 252 aaKnown RBP12.04□□□□□ -0.48
BRAT1-201ENST00000340611 VDAC2P45880 294 aaPredicted RBP12.04□□□□□ -0.48
BRAT1-201ENST00000340611 KLRD1Q13241 179 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 PSG5Q15238 335 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 GDF5OSQ5U4N7 250 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 HELTA6NFD8 242 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 IGHV1-8P0DP01 117 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 FABP2P12104 132 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 WFDC2Q14508 124 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 RNF183Q96D59 192 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 HINT2Q9BX68 163 aa12.04□□□□□ -0.48
BRAT1-201ENST00000340611 CSPG4Q6UVK1 2322 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 J3QKU1 62 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 PGPEP1Q9NXJ5 209 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 RABAC1Q9UI14 185 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 C9JCJ5 164 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 MYOD1P15172 320 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 PET117Q6UWS5 81 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 TEX45Q8NA69 505 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 CACNG8Q8WXS5 425 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 C11orf52Q96A22 123 aa12.03□□□□□ -0.48
BRAT1-201ENST00000340611 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
BRAT1-201ENST00000340611 IGHV3-72A0A0B4J1Y9 119 aa12.02□□□□□ -0.48
BRAT1-201ENST00000340611 OR5A1Q8NGJ0 315 aa12.02□□□□□ -0.48
BRAT1-201ENST00000340611 LINC00574Q9H8X3 128 aa12.02□□□□□ -0.48
BRAT1-201ENST00000340611 TCF19Q9Y242 345 aa12.02□□□□□ -0.48
BRAT1-201ENST00000340611 TET2Q6N021 2002 aaPredicted RBP12.02□□□□□ -0.49
BRAT1-201ENST00000340611 TEX15Q9BXT5 2789 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 INSL3P51460 131 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 ETDBQ3ZM63 59 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 IBA57Q5T440 356 aaKnown RBP12.02□□□□□ -0.49
BRAT1-201ENST00000340611 SLC25A48Q6ZT89 311 aaKnown RBP12.02□□□□□ -0.49
BRAT1-201ENST00000340611 MAPK1IP1LQ8NDC0 245 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 PSG8Q9UQ74 426 aa12.02□□□□□ -0.49
BRAT1-201ENST00000340611 IGHV4-30-2A0A087WSY4 118 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 TEPPQ6URK8 271 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 MOB3BQ86TA1 216 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 OR10X1Q8NGY0 326 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 ZNF257Q9Y2Q1 563 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 PRRC2AP48634 2157 aaKnown RBP12.01□□□□□ -0.49
BRAT1-201ENST00000340611 NOTCH2Q04721 2471 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 IGHV1-24A0A0C4DH33 117 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 FCGR2BP31994 310 aaPredicted RBP12.01□□□□□ -0.49
BRAT1-201ENST00000340611 FAM120AOSQ5T036 256 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 TMEM140Q9NV12 185 aa12.01□□□□□ -0.49
BRAT1-201ENST00000340611 F11RQ9Y624 299 aaKnown RBP12.01□□□□□ -0.49
BRAT1-201ENST00000340611 IGKV1-16P04430 117 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 ERVK-16P61578 105 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 TIGITQ495A1 244 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 TCTEX1D4Q5JR98 221 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 ARPC1AQ92747 370 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 SPAG8Q99932 426 aaPredicted RBP12□□□□□ -0.49
BRAT1-201ENST00000340611 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
BRAT1-201ENST00000340611 ZNF355PQ9NSJ1 428 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 UNC79Q9P2D8 2635 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 K7EMI3 77 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 B5MCH6 92 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 CSN3P07498 182 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 CT45A6P0DMU7 189 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 CT45A5P0DMU8 189 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 CT45A7P0DMV0 189 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 LMO4P61968 165 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 OR52E5Q8NH55 327 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 TMEM133Q9H2Q1 129 aa12□□□□□ -0.49
BRAT1-201ENST00000340611 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 HLA-DRB1P01911 266 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 COX8AP10176 69 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 A0A1B0GW15 77 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 ANXA2RQ3ZCQ2 193 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 SMIM20Q8N5G0 67 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 MAP1LC3CQ9BXW4 147 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 LY96Q9Y6Y9 160 aa11.99□□□□□ -0.49
BRAT1-201ENST00000340611 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 K7ERJ3 54 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 CLEC3BP05452 202 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 LIPFP07098 398 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 LINC00479Q96M42 142 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 S1PR3Q99500 378 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 IZUMO1RA6ND01 250 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 J3QR89 54 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 CHEK1O14757 476 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 FA2HQ7L5A8 372 aa11.98□□□□□ -0.49
BRAT1-201ENST00000340611 PLEKHA3Q9HB20 300 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms